Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_007377.1 Length=1027 Score E Sequences producing significant alignments: (Bits) Value seq192717 1270 0.0 >seq192717 Length=982 Score = 1270 bits (1408), Expect = 0.0 Identities = 871/982 (89%), Gaps = 0/982 (0%) Strand=Plus/Minus Query 22 AAAGATGAGCCTTCTAACCGAGGTCGAAACGTACGTTCTCTCTATCGTCCCGTCAGGCCC 81 ||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 982 AAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCC 923 Query 82 CCTCAAAGCCGAGATCGCACAGAGACTTGAAGATGTCTTTGCTGGGAAGAACACAGATCT 141 |||||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||| Sbjct 922 CCTCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCT 863 Query 142 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCCTGTCACCTCTGACTAAGGGGAT 201 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 862 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAAT 803 Query 202 TTTGGGATTTGTATTCACGCTCACCGTGCCAAGTGAGCGAGGACTGCAGCGTAGACGCTT 261 ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 802 TTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 743 Query 262 TGTCCAAAATGCCCTCAATGGGAATGGGGATCCAAATAACATGGACAGAGCAGTTAAACT 321 ||||||||||||||| |||||||||||||| || || |||||||| |||||||||||||| Sbjct 742 TGTCCAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACT 683 Query 322 GTATAGAAAGCTTAAGAGGGAGATAACATTCCATGGGGCCAAAGAAGTAGCGCTCAGTTA 381 || | ||||| || || || ||||| |||||||||||||| || || | || || || Sbjct 682 ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTA 623 Query 382 TTCTGCTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGGGCTGTGAC 441 ||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 622 TTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGAC 563 Query 442 CACTGAAGTGGCCTTTGCCGTGGTATGTGCAACCTGTGAACAGATTGCTGACTCCCAGCA 501 ||| |||| || |||| | || ||||| || ||||||||||||||||| || ||||| Sbjct 562 CACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCA 503 Query 502 TAGGTCTCACAGGCAAATGGTGACAACAACCAATCCACTAATAAGACATGAGAACAGAAT 561 | |||||||||| ||||||| || || |||||||||||||| || ||||| |||||||| Sbjct 502 TCGGTCTCACAGACAAATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAAT 443 Query 562 GGTTCTGGCCAGCACTACAGCTAAGGCTATGGAGCAAATGGCTGGATCGAGTGAGCAAGC 621 ||| ||||| |||||||| || ||||||||||| || ||||||||||||||||| || || Sbjct 442 GGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGC 383 Query 622 AGCAGAGGCCATGGAGGTTGCTAGTCAGGCCAGGCAAATGGTGCAGGCAATGAGAGCCAT 681 ||||||||||||||||||||||| |||| | ||||| ||||| || ||||||||| | || Sbjct 382 AGCAGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTAT 323 Query 682 TGGGACTCCTCCTAGCTCCAGTGCTGGTCTAAAAGATGATCTTCTTGAAAATTTGCAGGC 741 |||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 322 TGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGC 263 Query 742 CTATCAGAAACGAATGGGGGTGCAGATGCAACGATTCAAGTGACCCCCTTGTTGTTGCTG 801 ||| ||||| |||||||| ||||||||||| |||||||||||| || || || |||| | Sbjct 262 CTACCAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAG 203 Query 802 CGAGTATCATTGGGATCTTGCACTTTATATTGTGGATTCTTGATCGTCtttttttCAAAT 861 | | ||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct 202 CAAATATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTTTCAAAT 143 Query 862 GCATTTATCGCTTCTTTAAACACGGTCTGAAAAGAGGGCCTTCTACGGAAGGAGTACCTG 921 | |||||||| ||||||| ||||| |||||||||||||||||||||||||||| |||| Sbjct 142 GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTG 83 Query 922 AGTCTATGAGGGAAGAATATCGAAAGGAACAGCAGAGTGCTGTGGATGCTGACGATAGTC 981 |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||| ||| Sbjct 82 AGTCCATGAGGGAAGAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTC 23 Query 982 ATTTTGTCAGCATAGAGCTGGA 1003 ||||||||| ||||||||| || Sbjct 22 ATTTTGTCAACATAGAGCTAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3170421512804