Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_007380.1 Length=838 Score E Sequences producing significant alignments: (Bits) Value seq216031 829 0.0 >seq216031 Length=850 Score = 829 bits (918), Expect = 0.0 Identities = 665/802 (83%), Gaps = 0/802 (0%) Strand=Plus/Minus Query 37 TGCTTCCTTTGGCATGTCCGAAAACAAGTTGTAGACCAAGAACTAGGTGATGCCCCATTC 96 || |||||||||||| |||| || | | ||| |||| | | | | ||||||||||||||| Sbjct 848 TGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCATTC 789 Query 97 CTTGATCGGCTTCGCCGAGATCAGAAGTCCCTAAGGGGAAGAGGCAGCACTCTCGATCTA 156 ||||||||||| ||||||||||| |||||| ||| |||||||||| ||| || | || Sbjct 788 CTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCCTC 729 Query 157 GACATCGAAGCAGCCACCCGTGTTGGAAAGCAGATAGTAGAGAGGATTCTGAAGGAAGAA 216 || |||||| ||||||| | |||||| || || || || || |||| |||| || ||| Sbjct 728 GATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAA 669 Query 217 TCCGATGAGGCACTTAAAATGACCATGGCCTCCGCACCTGCTTCGCGATACCTAACTGAC 276 ||| ||| |||||| |||||| || || || | |||| ||||||| ||||| ||||| Sbjct 668 TCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC 609 Query 277 ATGACTATTGAGGAATTGTCAAGGGACTGGTTCATGCTAATGCCCAAGCAGAAAGTGGAA 336 ||||| | |||||| ||||| | |||||||||||||| ||||| | ||| || | | Sbjct 608 ATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATA 549 Query 337 GGCCCTCTTTGCATCAGAATAGACCAGGCAATCATGGATAAGAACATCATGTTGAAAGCG 396 |||||||||||| | || | |||||||| ||||||| |||||||| | |||||||| Sbjct 548 GGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAGAACATAGTACTGAAAGCG 489 Query 397 AATTTCAGTGTGATTTTTGACCGGCTAGAGACCCTAATATTACTAAGGGCTTTCACCGAA 456 || |||||||| || ||| |||| |||||||| | ||| |||||||||||||||| || Sbjct 488 AACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAG 429 Query 457 GAGGGAGCAATTGTTGGCGAAATTTCACCATTGCCTTCTCTTCCAGGACATACTATTGAG 516 ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct 428 GAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACTTATGAG 369 Query 517 GATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGATAACACAGTT 576 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| Sbjct 368 GATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAATGGTAACACGGTT 309 Query 577 CGAGTCTCTAAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGAATGGGAGACCT 636 ||||||||| ||| | ||||||||||||||||||||| | || ||||||||||||||||| Sbjct 308 CGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCT 249 Query 637 CCACTCACTCCAAAACAGAAACGGAAAATGGCGAGAACAATTAGGTCAAAAGTTCGAAGA 696 |||| ||||| | |||||| | ||| |||||||| ||||| || || || || || || Sbjct 248 TCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAGGA 189 Query 697 GATAAGATGGCTGATTGAAGAAGTGAGACACAGATTGAAGATAACAGAGAATAGTTTTGA 756 ||||| ||| | ||||||||| || | ||||||||||| |||||||||||||| || Sbjct 188 AATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTCGA 129 Query 757 GCAAATAACATTTATGCAAGCCTTACAGCTACTATTTGAAGTGGAACAAGAGATAAGAAC 816 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| | Sbjct 128 ACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGC 69 Query 817 TTTCTCGTTTCAGCTTATTTAA 838 |||||||||||||||||||||| Sbjct 68 TTTCTCGTTTCAGCTTATTTAA 47 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2567594887130