Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_026427.1 Length=985 Score E Sequences producing significant alignments: (Bits) Value seq192717 1240 0.0 >seq192717 Length=982 Score = 1240 bits (1374), Expect = 0.0 Identities = 860/975 (88%), Gaps = 0/975 (0%) Strand=Plus/Minus Query 1 ATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTCTCTATCATTCCATCAGGCCCCCTC 60 ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct 978 ATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCCCCTC 919 Query 61 AAAGCCGAGATCGCACAGAGACTTGAGGATGTTTTTGCAGGGAAGAACGCAGATCTCGAG 120 |||||||||||||| |||||||| || ||| |||||||| |||||| ||||||| ||| Sbjct 918 AAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCTTGAG 859 Query 121 GCTCTCATGGAGTGGATAAAGACAAGACCAATCCTGTCACCTCTGACTAAGGGGATTTTA 180 ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 858 GCTCTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAATTTTA 799 Query 181 GGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGGTTTGTC 240 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 798 GGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTC 739 Query 241 CAAAACGCCCTAAATGGGAATGGAGACCCAAACAACATGGACAAGGCGGTTAAATTATAC 300 ||||| ||||||||||||||||| ||||| ||||||||||| | || |||||| ||||| Sbjct 738 CAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACTATAC 679 Query 301 AAGAAACTGAAGAGGGAAATGACATTTCATGGAGCAAAGGAAGTTGCACTCAGTTACTCA 360 ||||| || || || ||||| || || ||||| || ||||| || |||| || || ||| Sbjct 678 AAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTATTCA 619 Query 361 ACTGGTGCGCTTGCCAGCTGCATGGGTCTCATATACAACAGAATGGGGACTGTGACCGCA 420 |||||||| |||||||| |||||||| |||||||||||||| ||||| || |||||| || Sbjct 618 ACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGACCACA 559 Query 421 GAAGGGGCTCTTGGACTAGTATGTGCCACTTGTGAGCAGATTGCTGACGCACAACATCGG 480 |||| ||| |||| ||||| |||||||||||||| ||||||||||| |||| |||||| Sbjct 558 GAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGG 499 Query 481 TCCCACAGGCAGATGGCGACTACTACTAACCCACTAATTAGGCATGAGAATAGAATGGTA 540 || ||||| || ||||| ||||| || || |||||||| |||||||| || |||||||| Sbjct 498 TCTCACAGACAAATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAATGGTG 439 Query 541 CTAGCCAGCACTACGGCTAAGGCTATGGAGCAGATGGCTGGATCAAGTGAACAGGCAGCG 600 || || ||||||||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct 438 CTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCA 379 Query 601 GAAGCCATGGAAGTTGCAAGTCAGGCTAGGCAAATGGTGCAGGCTATGAGAACAGTTGGG 660 || |||||||| ||||| | |||| ||||||| ||||| || || |||||||| ||||| Sbjct 378 GAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTATTGGG 319 Query 661 ACTCACCCTAACTCCAGTACAGGTCTAAAAGATGATCTTATTGAAAATTTGCAGGCCTAC 720 ||||| |||| ||||||| | ||||| |||||||| ||| |||||||||||||||||||| Sbjct 318 ACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGCCTAC 259 Query 721 CAGAACCGGATGGGAGTGCAACTGCAGCGGTTCAAGTGAGCCTCTAGTCGTTGCAGCTAA 780 ||||| || ||||||||||| ||||||| ||||||||| ||||| ||| ||||||| || Sbjct 258 CAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAGCAAA 199 Query 781 CATTATTGGGATATTGCACTTGATATTGTGGATTCTTGATCGTCTTTTCTTCAAATGCAT 840 || |||||||| |||||| |||||||||||||| |||||||||||| |||||||| || Sbjct 198 TATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTTTCAAATGTAT 139 Query 841 TTATCGTCGTTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAATGCCTGAGTC 900 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 138 TTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTGAGTC 79 Query 901 TATGAGGGAAGAATATCGGCAGGAACAGCAGAATGCTGTGGATGTTGACGATGGTCATTT 960 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 78 CATGAGGGAAGAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTCATTT 19 Query 961 TGTCAACATAGAGCT 975 ||||||||||||||| Sbjct 18 TGTCAACATAGAGCT 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3036460040432