Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_026428.1 Length=841 Score E Sequences producing significant alignments: (Bits) Value seq216031 693 0.0 >seq216031 Length=850 Score = 693 bits (768), Expect = 0.0 Identities = 638/807 (79%), Gaps = 0/807 (0%) Strand=Plus/Minus Query 35 ACTGCTTTCTTTGGCATGTCCGCAAACGATTTGCAGACCAAGAAATGGGTGATGCCCCAT 94 |||| || ||||||||| ||||||| |||||||||||| | | | ||||||||||||||| Sbjct 850 ACTGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCAT 791 Query 95 TTCTAGACCGGCTTCGCCGAGATCAGAAGTCCCTGAGAGGAAGAAGCAGCACTCTTGGTC 154 | || || ||||| ||||||||||| |||||| | | ||||||| ||| ||| ||||| | Sbjct 790 TCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCC 731 Query 155 TGGACATCAGAACTGCCACGCGTGAAGGAAAGCATATAGTGGAGCGGATTTTAGAGGAAG 214 | || ||| ||| ||||| | || || || || || ||||| |||| || | || | Sbjct 730 TCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGG 671 Query 215 AGTCAGATGAAGCATTTAAAATGAGTATTGCTTCAGTGCCAGCTCCACGCTATCTAACTG 274 | || || || ||| ||||| ||||| || || || || | ||||| || ||| Sbjct 670 AATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTG 611 Query 275 ACATGACTCTTGAAGAAATGTCAAGAGATTGGTTAATGCTCATTCCCAAACAGAAAATAA 334 ||||||| || || ||||||||| |||| ||||| |||||||| || | || || |||| Sbjct 610 ACATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAA 551 Query 335 CAGGGTCCCTATGCATTAGAATGGACCAAGCAATAGTGGACAAAAACATCACATTGAAAG 394 ||| | || ||| | || ||||||| || | |||| || ||||| | |||||| Sbjct 550 TAGGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAGAACATAGTACTGAAAG 491 Query 395 CAAATTTCAGTGTGATTTTCAATCGGCTTGAAGCCCTGATACTACTTAGAGCTTTTACGG 454 | || |||||||| || || || || | || || |||||||||| || ||||| || | Sbjct 490 CGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTG 431 Query 455 AAGAAGGAGCAATTGTAGGCGAAATCTCACCATTACCTTCTCTTCCAGGACATACTGACA 514 | || |||||||| || || ||||| |||||||||||||||||||||||||||||| | Sbjct 430 AGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACTTATG 371 Query 515 AGGATGTCAAAAATGCAATTGAGATCCTCATCGGAGGATTTGAATGGAATGATAACACAG 574 ||||||||||||||||| ||| | |||||||||||||| |||||||||||| |||||| | Sbjct 370 AGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAATGGTAACACGG 311 Query 575 TTCGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGCGATGAGGATGGGAGAT 634 ||||||||||||||| | ||||||||||||||||||||| | | |||||| |||||||| Sbjct 310 TTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGAC 251 Query 635 CTCCACTCTCTACAAAGTAGAAACGGGAAATGGAGAGAACAGTTAAGCCAGAAGTTCGAA 694 || |||| || || || ||||| | || ||| |||| || || | ||||| || || Sbjct 250 CTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAG 191 Query 695 GAAATAAGATGGTTGATTGAAGAAGTACGACATAGATTAAAAATTACGGAGAATAGCTTT 754 |||||||| ||||| ||||||||| | || || ||||| ||| || |||||||| || Sbjct 190 GAAATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTC 131 Query 755 GAGCAAATAACTTTTATGCAAGCCTTACAACTATTGCTTGAAGTGGAGCAAGAGATAAGA 814 || |||||||| ||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct 130 GAACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGA 71 Query 815 ACTTTCTCGTTTCAGCTTATTTAATGA 841 |||||||||||||||||||||||||| Sbjct 70 GCTTTCTCGTTTCAGCTTATTTAATGA 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2577163563728