Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_014791.1 Length=9070 Score E Sequences producing significant alignments: (Bits) Value seq714 82.4 4e-12 >seq714 Length=46959 Score = 82.4 bits (90), Expect = 4e-12 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 7305 AATAGTCCTGTTTTAGTCGAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCT 7364 ||| | ||||| ||| ||||||||||| | || |||||||| || | |||||| | ||| Sbjct 12881 AATGGACCTGTATTAATCGAAGATACAGGACTTTGCTTTAAAGCACTGAATGGAATGCCT 12940 Query 7365 GGGCCATACATAAAATGGTTTTTAAAAGAATTGGGTCTTGAAGGT 7409 || || | || |||||||||||||||| | |||| ||| ||| Sbjct 12941 GGACCGTTTATTAAATGGTTTTTAAAAGCGGTCGGTCCTGATGGT 12985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28895118151544