Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq21947 78.8 5e-12 seq12455 78.8 5e-12 >seq21947 Length=99496 Score = 78.8 bits (86), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 842 CAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGAC 901 |||||||||||||||||||||||||||| |||| | ||||| |||||| || | || || Sbjct 64975 CAGGCATAGTTCACCATCTTTCGGGTCCCAACGTGTACGCTCTTGCTCCGCCCCACCAAC 65034 Query 902 GCGGTCGGGTCGTAGTACGGGCCGGT 927 | || ||||| || |||||||||| Sbjct 65035 GATGT--GGTCG-AG-ACGGGCCGGT 65056 >seq12455 Length=71386 Score = 78.8 bits (86), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 842 CAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGAC 901 |||||||||||||||||||||||||||| |||| | ||||| |||||| || | || || Sbjct 35617 CAGGCATAGTTCACCATCTTTCGGGTCCCAACGTGTACGCTCTTGCTCCGCCCCACCAAC 35676 Query 902 GCGGTCGGGTCGTAGTACGGGCCGGT 927 | || ||||| || |||||||||| Sbjct 35677 GACGT--GGTCG-AG-ACGGGCCGGT 35698 Score = 78.8 bits (86), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 842 CAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGAC 901 |||||||||||||||||||||||||||| |||| | ||||| |||||| || | || || Sbjct 62283 CAGGCATAGTTCACCATCTTTCGGGTCCCAACGTGTACGCTCTTGCTCCGCCCCACCAAC 62342 Query 902 GCGGTCGGGTCGTAGTACGGGCCGGT 927 | || ||||| || |||||||||| Sbjct 62343 GACGT--GGTCG-AG-ACGGGCCGGT 62364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2858862839676