Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq744 93.3 2e-15 >seq744 Length=2546 Score = 93.3 bits (102), Expect = 2e-15 Identities = 66/72 (92%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAG-AAGTCGGGGTTTGTTGCA 8903 || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 2185 GCCCGTGTCGACCTTTTATCTAATAAATGCGTCCCTTCCAGAAAGTCGGGGTTTGTTGCA 2244 Query 8904 CG-ATT-GCTCT 8913 || ||| ||||| Sbjct 2245 CGTATTAGCTCT 2256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28405662427824