Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= NC_001948.1 Length=8744 Score E Sequences producing significant alignments: (Bits) Value seq4788 513 8e-142 >seq4788 Length=535 Score = 513 bits (568), Expect = 8e-142 Identities = 431/529 (81%), Gaps = 0/529 (0%) Strand=Plus/Minus Query 7795 CCCGGTGAATCAAATGAGGCTTTTGAAGCCCGGCTAAAATCGCTGGAGTTAGCTAGAGCT 7854 || || || || ||||| || | ||||||| |||| || | | |||||||| || ||| Sbjct 529 CCTGGCGAGTCTAATGAAGCATATGAAGCCAGGCTTAAGGCTTTAGAGTTAGCAAGGGCT 470 Query 7855 CAAAAGCAGCCGGAAGGTTCTAATGCACCACCTACTCTCAGTGGCATTCTTGCCAAACGC 7914 ||||| ||||||| ||| || || || ||||| ||||||||||| |||||| | Sbjct 469 CAAAAAGCTCCGGAAGTTTCCAACCAGCCTCCCACTCTTAGTGGCATTCTCGCCAAAAGG 410 Query 7915 AAGAGGATTATAGAGAATGCACTTTCAAAGACGGTGGACATGAGGGAGGTTTTGAAACAC 7974 || || |||| || |||||||| || ||||| ||||| ||| | || ||||| | || Sbjct 409 AAAAGAGTTATTGAAAATGCACTCTCGAAGACAGTGGATATGCGTGAAGTTTTAAGGCAT 350 Query 7975 GAAACGGTGGTGATTTCCCCAAATGTCATGGATGAAGGTGCAATAGACGAGCTGATTCGT 8034 ||| | || || | ||||||||||| |||||||| || |||||||| |||||||||||| Sbjct 349 GAATCTGTTGTACTCTCCCCAAATGTAATGGATGAGGGAGCAATAGATGAGCTGATTCGT 290 Query 8035 GCATTTGGTGAATCTGGCATAGCTGAAAGCGTGCAATTTGATGTGGCCATAGATATAGCA 8094 || ||||| || || |||||||| |||| ||||| |||||||| || ||||| || || Sbjct 289 GCTTTTGGAGAGTCGGGCATAGCCGAAAATGTGCAGTTTGATGTTGCAATAGACATTGCT 230 Query 8095 CGTCACTGCTCTGATGTTGGTAGCTCCCAGAGGTCAACCCTGATTGGCAAGAGTCCATTT 8154 || |||||||||||||| || || || |||||||||||||||||||| || || || || Sbjct 229 CGCCACTGCTCTGATGTGGGAAGTTCTCAGAGGTCAACCCTGATTGGTAAAAGCCCCTTC 170 Query 8155 TGTGACCTAAACAGATCAGAAATAGCTGGGATTATAAGGGAGGTGACCACATTACGTAGA 8214 || || |||| || || ||||| ||||| |||||||| |||||||||||| | || ||| Sbjct 169 TGCGAGTTAAATAGGTCTGAAATTGCTGGAATTATAAGAGAGGTGACCACACTTCGCAGA 110 Query 8215 TTTTGCATGTACTATGCAAAAATCGTGTGGAACATCCATCTGGAGACGGGGATACCACCA 8274 |||||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||| Sbjct 109 TTTTGCATGTACTACGCAAAAATTGTGTGGAACATCCATTTGGAGACGGGAATACCACCA 50 Query 8275 GCTAACTGGGCCAAGAAAGGATTTAATGAGAATGAAAAGTTTGCAGCCT 8323 ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 49 GCTAATTGGGCCAAGAAAGGATTTAATGAGAATGAAAAGTTTGCAGCCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27863198995408