Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_007652.1 Length=14071 Score E Sequences producing significant alignments: (Bits) Value seq1896 82.4 7e-12 >seq1896 Length=265363 Score = 82.4 bits (90), Expect = 7e-12 Identities = 203/295 (69%), Gaps = 31/295 (11%) Strand=Plus/Minus Query 6630 ACAACACCAACAGCCCCAAAAGCAAGCATAGCACC--CAAGAACAGACAGGCAACAACCa 6687 |||||| ||||| | ||| | ||| | |||| | ||| |||| |||| ||||||| Sbjct 49508 ACAACAACAACAACAACAACAACAACAACAGCAACAGCAACAACA-ACAG-CAACAACAG 49451 Query 6688 aaaaaaCCGAAACGGGCACCacaacaacaagcagagcaaagaaaaccaacaacc-caaca 6746 || ||| ||| | || ||||||||||| | ||||| | ||| |||||| ||||| Sbjct 49450 CAACAACAACAACAGCAACAACAACAACAAGAACAGCAACAACAAC-AACAACAACAACA 49392 Query 6747 gagacagcaacaacaactctcaaagcaacaacagaaacag--gcaagggcaaagaGGGGC 6804 |||||||||||||| | | ||||||||| | ||| |||| ||| || Sbjct 49391 ACAACAGCAACAACAACAACAACAACAACAACAGCAGCAGCAGCAA---CAACGA----- 49340 Query 6805 CAACA-CAGCACACAATCAAAGAACAGCCCGAA--ACAACAGCAGGAGAAACAACTAC-- 6859 ||||| ||||| |||| || |||||| || |||||||||| || |||||| || Sbjct 49339 CAACAGCAGCA-ACAAC--AACAACAGCAACAACAACAACAGCAGCAGCAACAACAACAA 49283 Query 6860 --CCCACAG-----TCAAGAAGAACAACCAGCAGGCCAGCCCCAACAACAAAAAC 6907 | |||| ||| || |||||| | || |||| ||||||||| ||| Sbjct 49282 CGACAACAGCAGCAACAACAACAACAACAACAAGAACAGCAACAACAACAACAAC 49228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 44906560959504