Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_001946.1 Length=8372 Score E Sequences producing significant alignments: (Bits) Value seq74459 145 4e-31 >seq74459 Length=1629 Score = 145 bits (160), Expect = 4e-31 Identities = 371/562 (66%), Gaps = 2/562 (0%) Strand=Plus/Plus Query 5223 TGGACGGTCTGATCCTGACTGGGAAAATGAAAAAGCTTTGATATTTATGAAAAGTCAACT 5282 ||| || || ||| |||||| || || ||| ||| | || |||||| ||| | Sbjct 56 TGGCCGTTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATT 115 Query 5283 TTGCACAAAGTTTGACAACAGATTCAGAGCAGCCAAAGCTGGGCAAACCCTTGCTTGCTT 5342 ||||| || ||||| || |||| || | || || |||| ||| | | | ||||| Sbjct 116 GTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTT 175 Query 5343 TCATCATAATGTGCTTTGTCGTCTTGCTCCATACATCAGGTATATTGAGAAAAAGGTTTT 5402 | ||| ||||| || | | || || |||||||||||||| ||| ||||||| | Sbjct 176 TTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAAT 235 Query 5403 CTCTCACCTACCTGACAATTATTACATTCATTCAGGCAAGAATTTTGATGAGCTGAG-GA 5461 | ||||| || | ||||| ||| || ||| || || ||||| | || Sbjct 236 GGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGA 295 Query 5462 GCTGGGTGTTGAGAAACTCTTTCACTGGGATGTGCACTGAGTCTGACTATGAAGCCTTTG 5521 | ||||| | | |||| || | ||||| || || ||||||||||| |||| Sbjct 296 G-TGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTG 354 Query 5522 ACTCTTCCCAAGATGCCAACATATTGGCATTTGAAGTTAGTCTGATGCGCTACTTAAGGC 5581 | | || || ||| |||| |||| |||||| | |||||| || | || Sbjct 355 ATGCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGA 414 Query 5582 TCCCAAGGGACTTAATTGAGGATTACAAGTATCTGAAGTTTAACACCAGATCTAAACTTG 5641 |||||||||| || | | || || | | | | ||| || | | || ||||| | Sbjct 415 TCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGG 474 Query 5642 GGCAGTTCGCTGTGATGAGATTTACTGGGGAAGCAGGCACTTTTCTGTTTAATACCCTTG 5701 || | || || | |||||||| | ||||||||| | || ||||| || ||||| || | Sbjct 475 GGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCG 534 Query 5702 CAAATATGGTTTTCACGTTCATGAGGTATGACATAAATGGTAAGGAATCCATCTGCTTTG 5761 | |||||| | ||||| || | | ||||||| ||| ||| || || || ||||||| Sbjct 535 CTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTG 594 Query 5762 CTGGTGATGATATGTGTGCTAA 5783 | || ||||| |||||||| || Sbjct 595 CAGGAGATGACATGTGTGCGAA 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26650394664832