Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_001948.1 Length=8744 Score E Sequences producing significant alignments: (Bits) Value seq74459 165 5e-37 >seq74459 Length=1629 Score = 165 bits (182), Expect = 5e-37 Identities = 378/568 (67%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 5664 TGATTTTTATGAAGTCACAACACTGTACTAAATTTGACAACAGGCTTAGAGTAGCTAAAG 5723 || |||| ||||| |||||| || || |||||||| || | |||| | ||||| | Sbjct 94 TGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGG 153 Query 5724 CTGGGCAAACCCTTGCTTGCTTCCAACATGCTGTTCTGGTTCGCTTTGCACCCTATATGA 5783 ||| ||| | | | ||||| || || || || | || ||||| || || | Sbjct 154 CTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCA 213 Query 5784 GATACATTGAGAAAAAGCTAATGCAAGCTCTGAAGCCT---AACTTCTACATCCATTCAG 5840 | || || ||| ||||| ||||| | || || ||| || |||||||||||| | Sbjct 214 GGTATATCGAGCAAAAGGTAATGGAGGCGTTG---CCTGAGAAGTTCTACATCCATAGTG 270 Query 5841 GGAAAGGTCTNGACGAGCTGAACGAGTGGGTCAGAACTAGAGGATTCACTGGAATTTGCA 5900 | || || | || ||||| || ||||||||| | | ||| || |||||| Sbjct 271 GTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCA 330 Query 5901 CAGAATCAGACTACGAAGCCTTTGATGCTTCCCAAGACCACTTCATCCTAGCATTCGAAT 5960 | ||||||||||| ||||| |||||||| || || || || | |||| | || || ||| Sbjct 331 CGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAA 390 Query 5961 TGCAGATAATGAAATTTTTGGGGTTACCTGAAGATTTAATTTTGGACTATGAATTCATAA 6020 | | ||| | | | ||||| | || ||||| | |||||| || || | Sbjct 391 TCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTA 450 Query 6021 AAATTCATTTGGGATCAAAGCTCGGATCATTCTCTATAATGAGGTTTACTGGGGAGGCCA 6080 | | || | || ||||| || || || | || ||||| || | ||||| || | Sbjct 451 AGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAA 510 Query 6081 GCACATTTCTGTTTAACACTATGGCTAACATGTTGTTCACCTTTCTGAGGTACGAACTAA 6140 | |||||||| || || || | ||||| ||| | ||||| ||||| | ||| || ||| Sbjct 511 GTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAA 570 Query 6141 CAGGCTCTGAGTCAATAGCATTTGCAGGTGATGACATGTGTGCTAATCGAAGGTTGCGGC 6200 || ||| || |||||||| |||||||||||||| |||| ||| ||||| Sbjct 571 GTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAATCAAAGACTGCGGG 630 Query 6201 TTAAAACAGAGCATGAGGGTTTTCTGAA 6228 || | |||| ||||| ||||| |||| Sbjct 631 TTTCAGCAGAACATGAAGGTTTCTTGAA 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27839687708896