Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_002468.1 Length=8432 Score E Sequences producing significant alignments: (Bits) Value seq74459 156 2e-34 >seq74459 Length=1629 Score = 156 bits (172), Expect = 2e-34 Identities = 351/525 (67%), Gaps = 12/525 (2%) Strand=Plus/Plus Query 5326 TTCATGAAAAGTCAATTGTGCACTAAATTTGACAACAGATATAGAGACGCAAAAGCCGGG 5385 ||||||||| ||||||||||| |||||||| || ||| ||| || || || || | Sbjct 99 TTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCA 158 Query 5386 CAGACCCTGGCGTGCTTCCACCACAACGTGCTCTGCAGATTGGCTCCATACGTGAGATAC 5445 || | | | |||||| ||| ||||||||||||||| || || ||| | || || Sbjct 159 CAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTAT 218 Query 5446 ATTGAGAAAAAAGTGTTCAAAGCTTTGCCAAGGAATCTGTATATTCACTCTGGTAAAAAT 5505 || ||| |||| || | | || ||||| ||| | || || || |||||| Sbjct 219 ATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGG 278 Query 5506 TTTGATGATCTGCAAGATTGGGTTATTCAAAACAATTTTGTTGGGACCTGCACTGAATCT 5565 || || || || | || ||||| ||| ||||| || ||||| ||||| Sbjct 279 TTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCA 338 Query 5566 GACTATGAGGCTTTTGACTCCTCACAGGATGCCAACATTCTGGCCTTTGAAGTTAGCCTG 5625 |||||||| || ||||| | ||||||||| |||| |||| |||||| | |||| Sbjct 339 GACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTG 398 Query 5626 ATGAATTACCTCAATTTACCAAGAGATCTTATTGAGGATTACAAGCACTTGAAGTTTAAC 5685 ||| | || || | ||||| ||| || ||| | || | || | |||| Sbjct 399 ATGGAGTATCTGGGGATCCCAAGGGAT-TTGGTGA--AAGACTATATTTTTA---TTAAG 452 Query 5686 ACTCAC------TCCAAATTAGGGAGATTTGCAGTCATGAGATTCACAGGGGAAGCTGGA 5739 || ||| || ||| | |||| ||||| | ||||||||| | |||||||| | Sbjct 453 ACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGT 512 Query 5740 ACTTTTCTGTTCAACACATTGGCCAACATGGTTTTCACTTTTATGAGGTATGAAACAAGT 5799 || ||||| ||||| || | || || ||| | ||||||||| | | |||||| |||| Sbjct 513 ACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGT 572 Query 5800 GGGCGCGAGTCAATATGCTTCGCTGGTGATGACATGTGCGCCAAT 5844 || ||| || ||||| || || ||||||||||| || ||| Sbjct 573 GGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAAT 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26842216123552