Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_002552.1 Length=8612 Score E Sequences producing significant alignments: (Bits) Value seq74459 223 2e-54 >seq74459 Length=1629 Score = 223 bits (246), Expect = 2e-54 Identities = 563/846 (67%), Gaps = 20/846 (2%) Strand=Plus/Plus Query 5154 TGTACTAAATTTGATAACCGATTCAGGCTCGCAAAAGCAGCGCAGAGTATAGTTTGCTTC 5213 || || |||||||| || ||||| ||| || || || || || ||||| ||||| Sbjct 117 TGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTT 176 Query 5214 CAACATGCAGTTCTTTGTCGCTTTGCGCCATTTATGCGGTACATCGAGATGAAGGTGCAT 5273 || || || || || | || || || | || |||| |||||| ||||| Sbjct 177 TCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATG 236 Query 5274 GAGGTACTTCCAGCTAGGTTCTACATACATTCTGGCAAGGGATTGGATGAACTAAACTCT 5333 |||| | || | | ||||||||| ||| ||| ||||| ||||| || || || Sbjct 237 GAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAG 296 Query 5334 TGGGTGAAGGGCGGAAAGTTTGATGGAGTCTGCACTGAATCAGATTATGAAGCCTTTGAC 5393 ||||| | || || || | || || ||||| |||||||| |||||||| ||||| Sbjct 297 TGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGAT 356 Query 5394 GCATCGCAGGATGAGTTTATAATGGCGTTTGAGCTTGAGCTAATGAAGTTTTTGCGCCTC 5453 ||||| |||||| | | || ||||| ||||| | | || ||| ||| | || | || Sbjct 357 GCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATC 416 Query 5454 CCACATGATATGATTGAAGATTACAAGTTCATCAAGACTAGCCTCGGTTCAAAGTTGGGC 5513 ||| ||| || | |||| || | || || ||||| |||||||||||| |||| Sbjct 417 CCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGG 476 Query 5514 AATTTTGCTATAATGCGTTTCTCAGGCGAGGCGAGCACATTCCTCTTTAATACCTTAGCA 5573 |||||||| || ||| | ||||| || || || || ||||| ||||| ||||| | || Sbjct 477 AATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCT 536 Query 5574 AATATGCTATTTACTTTCATGAAGTATGAGATAAAAGGGGATGAGTACATTTGCTTTGCA 5633 |||||||| || ||||| | |||||||| ||| || | ||| |||||||||||| Sbjct 537 AATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCA 596 Query 5634 GGTGATG--ATATGTGCGCTTCAAGGGAATTGAAAGTCGTTGGGAAATACAAGAA-ATTC 5690 || |||| || |||||| |||| | | || || || | | ||| ||| || Sbjct 597 GGAGATGACATGTGTGCGAATCAAAG--ACTGCGGGT--TTCAGCAGAACATGAAGGTTT 652 Query 5691 CTTGATAAGTTA---AAGCTGAAGGCCAAGGTCCAAATGACCCAAAAGCCGACATTCTGC 5747 |||| || ||| ||||| || || || || | || |||| || || || || Sbjct 653 CTTG--AATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGT 710 Query 5748 GGTTGGCACCTCTGCCCAGATGGGATTTACAAGAAGCCACAGTTGGTTTTCGAACGGATG 5807 || ||| |||| | |||| |||| ||||| || ||| | | | ||| |||| Sbjct 711 GGCTGGAACCTGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAA-AGATG 769 Query 5808 -TGCATCGCGCTAGAGTTAAATAACTTGGCCAATTGTATAGATAATTATGCTATCGAAGT 5866 ||||| || |||| ||| | || |||| || |||||||| || || ||| | Sbjct 770 CTGCATTGCAAAAGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACT 829 Query 5867 GGCTTTTGCATATCGTCTAGGAGAGCGTGCTGTGAATCGGATGGATGAGGAGGAGGTTGG 5926 | | ||| || | ||| | |||||| | |||||||||||| || | || Sbjct 830 TGGGTATGCCTACAAGTTGAAAGAACTCGCTGTGTGTGAGATGGATGAGGAAGAAGCTGA 889 Query 5927 TGCATTCTACAATTGCGT---GCGTCTCATAGTGAGGAATAAACACCTGCTTAAGTCTGA 5983 ||||||| ||| || || | ||||| | |||||| || || || |||||||| Sbjct 890 AGCATTCTTCAACTGTGTTAAAATTGTCATA---AAGAATAAGCATCTCCTAAAGTCTGA 946 Query 5984 CGTGCG 5989 || || Sbjct 947 TGTTCG 952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27417680499712