Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_003870.1 Length=8146 Score E Sequences producing significant alignments: (Bits) Value seq74459 181 5e-42 >seq74459 Length=1629 Score = 181 bits (200), Expect = 5e-42 Identities = 300/428 (70%), Gaps = 10/428 (2%) Strand=Plus/Plus Query 5218 GGTGAATGCACTGAATCGGATTATGAGGCCTTTGATGCAAGTCAAGATCACTATATACTG 5277 |||| ||||| ||||| || ||||| || ||||||||| || ||||| || || || Sbjct 321 GGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATG 380 Query 5278 GCCTTTGAATTAGCATTAATGAAGTACCTTGGTTTACCCAATGAGTTGATAGAGGACTAC 5337 || |||||| | || | ||| |||| || || | || | || ||| | | ||||| Sbjct 381 GCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTAT 440 Query 5338 AAGTACATTAAGATTCATTTGGGTTCAAAATTGGGTGATTTTGCCATAATGAGATTCACC 5397 | | ||||||| || | ||||||||| |||| ||||||| || ||||||||| || Sbjct 441 ATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCC 500 Query 5398 GGTGAAGCCAGCACTTTCTTATTTAACACAATGGCAAATATGCTTTTCACTTTTCTGGTC 5457 || ||||| || || || | || || || | || |||||||| ||||||||||| Sbjct 501 GGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAG 560 Query 5458 TATGATATCAAAGGCAATGAGTCAATTTGCTTTGCTGGCGATGACATGTATGCAAATACA 5517 ||||| | | || || ||| ||||||||||| || |||||||||| ||| ||| | Sbjct 561 TATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAATCAA 620 Query 5518 AGTCTTAAGACATGCAGCAAGAACA-AAAGTTTGCTTAAAAAGTTTAC----ACTCAAAG 5572 || | | | | |||| |||||| ||| || ||| || ||||| || |||| Sbjct 621 AGAC-TGCGGGTTTCAGC-AGAACATGAAGGTTTCTTGAA---TTTACTGAAGCTAAAAG 675 Query 5573 CTAAAGTTCAGGTAACTGAAAGCCCAACATTTTGCGGATGGCACTTGACAGAGGATGGAA 5632 ||||||| | || |||| ||||| ||||| || ||| || |||| | |||| | Sbjct 676 CTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCTGACGCGGTATGGCA 735 Query 5633 TTTATAAG 5640 ||| |||| Sbjct 736 TTTTTAAG 743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25927867170320