Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_005138.1 Length=8394 Score E Sequences producing significant alignments: (Bits) Value seq74459 369 2e-98 >seq74459 Length=1629 Score = 369 bits (408), Expect = 2e-98 Identities = 635/913 (70%), Gaps = 22/913 (2%) Strand=Plus/Plus Query 5013 AGGTTTGATTTTTTCGAAAAGTCAAATATGCACGAAATATGACAACCGTTTCAGAGATGC 5072 ||| ||| |||| |||| ||| | |||||||||| ||| || || || || ||||| Sbjct 89 AGGCTTGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGC 148 Query 5073 TAAAGCAGCCCAAACAATCGTGTGCTTTCAACACTCGGTACTATGCAGATTCGCACCCTA 5132 ||| || || ||| | || ||||||||| ||| | || || |||||||||||||| || Sbjct 149 TAAGGCTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTA 208 Query 5133 TATGCGTTACATCGAGAAAAAACTGAACGAAGCTTTGCCCGCAAAGTATTACATCCACTC 5192 || | || |||||| |||| | | || || ||||| | |||| |||||||| Sbjct 209 CATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAG 268 Query 5193 AGGCAAAGGACTGGACGAGCTCAGTGCTTGGGTCAAAATAGGCGGGTTCGGGGACGTCTG 5252 || || || |||| ||||| | || |||||| || ||| | || || Sbjct 269 TGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTG 328 Query 5253 CACTGAATCCGACTACGAGGCCTTTGACGCCAGCCAGGATCAATACATCATGGCTTTTGA 5312 ||| ||||| ||||| || || ||||| || |||||||||||||||||||||||||| Sbjct 329 CACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGA 388 Query 5313 GATTTGCCTAATGCGCTACCTAGGCCTACCCCATAGCTTAGTTGAA-GATTACAAATTCA 5371 || ||| ||| || || || | ||| | | || | |||| || || | || | Sbjct 389 AATCGCCCTGATGGAGTATCTGGGGAT-CCCAAGGGATTTGGTGAAAGACTATATTTTTA 447 Query 5372 TTAAGACGCATCTTGGTTCGAAACTCGGGAATTTCGCGATTATGCGTTTCTCTGGCGAGG 5431 ||||||| || || ||||| ||||| |||||||| ||||||||| | ||||| || || | Sbjct 448 TTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAG 507 Query 5432 CTAGCACATTTCTCTTTAACACGATGGCAAACATGCTATTTACTTTTCTGAGGTACGACA 5491 | || ||||||||||| || ||| | || || ||||| || |||||||| | ||| ||| Sbjct 508 CAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACT 567 Query 5492 TCAAAGGCAATGAGCGTATATGTTTTGCAGGCGACGACATGTGCTCCAACAAGAGGCTAT 5551 | | || || ||| | || || |||||||| || |||||||| | || | || || Sbjct 568 TAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAATCAAAGACTGC 627 Query 5552 TTGTATCATCTAAACATGCTGATTTCCTCGGCAAGT--TGAAACTCAAAGCTAAAGTGGC 5609 || ||| | |||||| | |||| | | | | |||| || ||||||||||||| Sbjct 628 GGGTTTCAGCAGAACATGAAGGTTTCTT--GAATTTACTGAAGCTAAAAGCTAAAGTGGG 685 Query 5610 CCATACAAAGACCCCGACCTTCTGTGGTTGGAACCTTTGTCCACATGGGATCTTCAAGAA 5669 |||| | | || || || ||||| |||||||| | |||| || || ||||| Sbjct 686 TTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCTGACGCGGTATGGCATTTTTAAGAA 745 Query 5670 ACCCCAGCTAGTGTTCGAACGACTATGCATAGCAAAAGAAACAAACAACCTAGTAAATTG 5729 ||||||||| | | ||| || ||||| |||||||| | || |||| | |||| Sbjct 746 ACCCCAGCTCATACTTGAAAGATGCTGCATTGCAAAAGAGAGGAATGTGCTAGCAGATTG 805 Query 5730 CATAGATAACTACGCTATTGAGGTCGCTTTCGCCTACAAGATGGGTGAAAGAGCACG-TG 5788 ||| ||||| ||||| ||||| | | | |||||||| | ||||||| | || || Sbjct 806 CATCGATAATTACGCCATTGAACTTGGGTATGCCTACAA----GTTGAAAGAACTCGCTG 861 Query 5789 AGCG---CATGGATGAAGAAGAGCTTGAAGCCTTTTACAATTGCGTGCGTATAATTGTC- 5844 | | |||||||| ||||| |||||| || | ||| || || || ||||||| Sbjct 862 TGTGTGAGATGGATGAGGAAGAAGCTGAAGCATTCTTCAACTGTGT---TAAAATTGTCA 918 Query 5845 --AAAAATAAGCATCTGTTGAAATCAGACGTGCGTAACGTGTATGAGGAACAATTAGATT 5902 || ||||||||||| | || || || || ||||| |||| || | | || || | Sbjct 919 TAAAGAATAAGCATCTCCTAAAGTCTGATGTTCGTAAATTGTACGAAGCATCATAAGGT- 977 Query 5903 AGAAGCTTAGGTT 5915 |||||||||| Sbjct 978 -CTAGCTTAGGTT 989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26720729199696