Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_007289.1 Length=8478 Score E Sequences producing significant alignments: (Bits) Value seq74459 172 3e-39 >seq74459 Length=1629 Score = 172 bits (190), Expect = 3e-39 Identities = 361/530 (68%), Gaps = 6/530 (1%) Strand=Plus/Plus Query 5099 GGCATGGTCTTCTCAAAGTCTCAACTCTGCACAAAGTTCGACAATCGGTTCAGGGATGCG 5158 ||| |||| ||| || || ||| | ||||| || || || ||||| || |||||||| Sbjct 90 GGCTTGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCT 149 Query 5159 AAAGCAGCGCAAACCATTGTCTGCTTCCAACATAGCGTCCTATGCCGCTTTGCTCCGTAC 5218 || || || ||| | || || ||||| || ||| || ||| | || || || ||| Sbjct 150 AAGGCTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTAC 209 Query 5219 ATGAGGTACATTGAAAAGAAACTCAATGAAGTATTACCGGCAAGGTTCTACATTCATTCG 5278 || ||||| || || | || | | || | || || | | ||||||||| ||| Sbjct 210 ATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGT 269 Query 5279 GGCAAAGGCTTGGAAGAGCTGAATAAATGGGTTATAGAGTCCAAATTTGACGGGT-TGTG 5337 || || || ||||| ||||| ||| | ||||| | || ||||| ||| | || Sbjct 270 GGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTC-GTGGTAATTTCCAAGGTGTTTG 328 Query 5338 CACAGAGTCGGACTATGAAGCCTTCGACGCTAGTCAAGATCAGTACATAGTGGCGTTTGA 5397 ||| || || ||||||||||| || || || || ||||| ||||| |||| ||||| Sbjct 329 CACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGA 388 Query 5398 GCTAGCATTGATGAAGTACTTGGGCTTGCCAAATGATCTCATAGAGGATTACAAGTACAT 5457 | || ||||| |||| |||| | |||| ||| | | | || || | | || Sbjct 389 AATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTAT 448 Query 5458 CAAAACGCATCTGGGCTCAAAGTTAGGGAACTTCGCCATAATGCGCTTCTCCGGTGAGGC 5517 || || || || || ||||| | ||||| || || || ||| | |||||||| || || Sbjct 449 TAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGC 508 Query 5518 TAGCACCTTCTTGTTCAACACCATGGCCAATATGCTTTTCAC-ATTCTTGAGATACAAGC 5576 || || || | ||||| || | || |||||||| ||||| ||||| || || | | Sbjct 509 AAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAG-TATGA-C 566 Query 5577 TGAAG-GGGGATGAGCGGATATGCTTCGCTGGTGATGACATGTGCGCCAA 5625 | ||| || | ||| |||| ||||| || || ||||||||||| || || Sbjct 567 TTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAA 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26989279241904