Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_008552.1 Length=8281 Score E Sequences producing significant alignments: (Bits) Value seq74459 351 5e-93 >seq74459 Length=1629 Score = 351 bits (388), Expect = 5e-93 Identities = 582/832 (70%), Gaps = 10/832 (1%) Strand=Plus/Plus Query 4701 GAGAATTTGAGGAAAAGAAGACAAGCAAGAGTGCGGCCGTGATTGAAAATCACAGTGGGA 4760 |||| || || || |||||||| || ||||| ||| | |||||||| || ||| Sbjct 1 GAGACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCC 60 Query 4761 GA--AGCTGCAGAGATTGGTTGATTGATTTAGGATTCTTATTCATTAAAAATCAACTCTG 4818 | | | || ||| ||| || ||| ||| || | ||||| ||| ||| | || Sbjct 61 GTTCAAAT-CA-AGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTG 118 Query 4819 CACCAAATTTGAGAAACGTTTTGCTGATGCTAAAGCAGCCCAAACAATACTATGTTTCCA 4878 ||| |||||||| || || ||| |||||||| || || ||| | ||| | || || Sbjct 119 CACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTC 178 Query 4879 ACATGAGGTACTTTGCAGATTTGCACCTTATGTACGATACATAGAGAAAAAGCTTAATGA 4938 || | || || |||||||| |||||||| | | || || ||| ||||| | | || Sbjct 179 TCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGA 238 Query 4939 TGCTTTACCAGCAAAGTATTATATCCACAGCGGAAAGAATATTGATGATCTTAATGATTG 4998 || || || | |||| || ||||| || || ||| | || || |||||||| || Sbjct 239 GGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTG 298 Query 4999 GGTCAAGGCTAACAACTTCTCTGGAGTTTGCACTGAATCTGATTATGAAGCCTTTGACGC 5058 |||| | || ||| || |||||||| ||||| || |||||||| ||||| || Sbjct 299 GGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGC 358 Query 5059 ATCACAAGATCATTACATCATGGCTTTCGAGGTCGCAGTAATGAAATACCTCGGTCTTCC 5118 |||||| ||||| |||||||||||||| || |||| | ||| | || || || | || Sbjct 359 ATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCC 418 Query 5119 AAGGGACCTGGTGAATGACTACATCTTTATTAAAACGCATCTAGGTTCTAAACTCGGAAG 5178 |||||| ||||||| ||||| || |||||||| || || || ||||| ||||| || | Sbjct 419 AAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAA 478 Query 5179 CTTCGCTATCATGAGGTTTTCTGGTGAAGCCAGCACTTTCTTGTTCAACACCATGAGTAA 5238 || || || ||||| || || || ||||| || || || | ||||| || | ||| Sbjct 479 TTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAA 538 Query 5239 TATGCTCTTCACGTTCATGAAGTATGAGATAACTGGAAAAGAATCAATATGCTTCGCAGG 5298 |||||||||||| || | |||||||| ||| ||||||||| || ||||| ||||| Sbjct 539 TATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGG 598 Query 5299 TGATGACATGTGTGCTTCCAAAAGACTTC--GATTGAGTACAGTGCATTCTAGTTATCTA 5356 |||||||||||||| ||||||| | | || || ||| || | || | ||| Sbjct 599 AGATGACATGTGTGCGAATCAAAGACTGCGGGTTTCAG--CAGAACA-TGAAGGTTTCTT 655 Query 5357 GAA-AAATTGAGGTTGAAGGCTAAAGTGTGTTTCACTTCAAGACCCACTTTCTGTGGTTG 5415 ||| | ||| | | || ||||||||| |||| || || ||| ||||| ||||| || Sbjct 656 GAATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTG 715 Query 5416 GAGTCTGAATAGACTAGGCATTTTCAAGAAACCTCAGCTTGTATATGGGAGAATGTGCAT 5475 || |||| | |||||||| |||||||| ||||| || || ||| ||||| Sbjct 716 GAACCTGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCTGCAT 775 Query 5476 TGCGATAGAGAAGAATAATCTGCAAAACTGCATAGATAATTATGCCATAGAA 5527 ||| | ||||| |||| || | | ||||| |||||||| ||||| ||| Sbjct 776 TGCAAAAGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAA 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26359465452440