Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_009087.2 Length=8855 Score E Sequences producing significant alignments: (Bits) Value seq74459 246 2e-61 >seq74459 Length=1629 Score = 246 bits (272), Expect = 2e-61 Identities = 638/958 (67%), Gaps = 26/958 (3%) Strand=Plus/Plus Query 5266 GATTTTGAGGAAAAGAAAACAAGCAAAAGTGCGGTCATTATAGAGAATCATGCGGGTCGG 5325 || || || || ||||| || |||||||| | ||| || || || ||||| || || Sbjct 3 GACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGT 62 Query 5326 TCATGTAGAGACTGGATGATTGAAGTAGGGCTCATCTTCTCCAAAAGTCAATTATGCACA 5385 ||| | ||||||| || || ||| | | ||| ||| ||||| ||||| Sbjct 63 TCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACG 122 Query 5386 AAGTTTGATAATAGGTTTAGGGTCGCGAAGGCAGCACAGAGTATTGTTTGCTTCCAACAC 5445 || ||||| ||| | ||||||| || ||||| ||||| || || ||||| ||| Sbjct 123 AAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCAC 182 Query 5446 GCCGTACTTTGCCGTTTCGCGCCTTATATGCGCTACATTGAAGCTAAACTCCATG-AGGC 5504 ||||| || ||| | ||||| ||||| || | || || || || ||| ||| |||| Sbjct 183 GCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGA-GCAAAAGGTAATGGAGGC 241 Query 5505 GCTACCT-AGCAGATTCTATATTCACTCAGGGAAGGGTCTGGATGAGCTTAATGAGTGGG 5563 | | ||| || || ||||| || || || ||||| |||| |||||||||||||||| Sbjct 242 GTTGCCTGAGAAG-TTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGG 300 Query 5564 TTATCAAGGGCAAATTCGAGGGCATCTGCACTGAGTCAGATTATGAGGCCTTCGACGCTT 5623 | | || || ||| | || | ||||| || ||||| ||||| || || || || | Sbjct 301 TCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCAT 360 Query 5624 CTCAGGATCAGTATATTGTTGCTTTTGAGTTAGCCCTAATGGAGTATCTAGGTTTGCCAA 5683 | |||||||| || || | |||||||| | ||||| ||||||||||| || | |||| Sbjct 361 CACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAA 420 Query 5684 GGGACTTAATTGAGGACTACGCGTTCATCAAGTGTCATTTAGGGTCCAAATTAGGCAACT 5743 |||| || | | ||||| || || ||| || | || || ||| | || || | Sbjct 421 GGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATT 480 Query 5744 TCGCGATCATGCGGTTTTCCGGGGAGGCTAGTACGTTTCTGTTTAATACTATGGCCATCA 5803 | ||||| ||| | || |||||||| || ||||| ||||| || ||||| | || | | Sbjct 481 TTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATA 540 Query 5804 TGCTCTTCAC-CTTCTTGCGATACAATATTAAAGACAGCGAGCACATCAACTCAATTGGG 5862 |||||||||| ||||| | || | | | | | ||| || || || Sbjct 541 TGCTCTTCACTTTTCTTAAG-TATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGA 599 Query 5863 GATGACA--TGTGCGCATCCGAACCCCCGTGCATCAAGAAAGAGCATGAGGGTTTTTTGA 5920 ||||||| |||||| ||| | | || | ||| ||| ||||| ||||| ||| Sbjct 600 GATGACATGTGTGCGAATCAAAGACTGCGGGTTTCA--GCAGAACATGAAGGTTTCTTG- 656 Query 5921 GCAAGTTA---AAATTGAAAGCCAAAGTATTCTTTCTGGCTAAACCAACTCTTTGCGGAT 5977 || ||| || | ||||| ||||| ||| | ||||||||| |||| || | Sbjct 657 --AATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCT 714 Query 5978 GGCATCT----CTGTTCTGATGGGATATATAAGAAGCCGCAGTTGGTATTGGAACGTATG 6033 || | || | || |||| || | |||||| || ||| | || | ||| | ||| Sbjct 715 GGAACCTGACGCGGT----ATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAG-ATG 769 Query 6034 -GGTAGTGCTAAAGAGAAGAATAATCTAGCCAACTGTCTAGACAATTACGCCATTGAGGT 6092 | | ||| ||||||| |||| ||||| | || | || |||||||||||||| | Sbjct 770 CTGCATTGCAAAAGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACT 829 Query 6093 TTCCTACGCCTATAACCTCCGTGAGCGAGCGGTTAATAGGATGGATGAGGAGGAGTTGGA 6152 | || ||||| || | || | || || | |||||||||||| || || Sbjct 830 TGGGTATGCCTACAAGTTGAAAGAACTCGCTGTGTGTGAGATGGATGAGGAAGAAGCTGA 889 Query 6153 GGCTGCCTACAATTGCGTCAGGATAATCATCAAGAATAAGAAGCTCCTAAAGTCCGAT 6210 || || ||| || || | || |||| ||||||||| | ||||||||||| ||| Sbjct 890 AGCATTCTTCAACTGTGTTAAAATTGTCATAAAGAATAAGCATCTCCTAAAGTCTGAT 947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28194557407528