Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_009759.1 Length=8404 Score E Sequences producing significant alignments: (Bits) Value seq74459 298 3e-77 >seq74459 Length=1629 Score = 298 bits (330), Expect = 3e-77 Identities = 600/874 (69%), Gaps = 28/874 (3%) Strand=Plus/Plus Query 4986 TGGTGTTCTCCAAATCACAGTTGTGCACAAAGTTTGACAACAGATTTCGAGAGGCAAAGG 5045 |||| ||| |||||||| |||||||| || ||||| || ||||| | || || |||| Sbjct 94 TGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGG 153 Query 5046 CAGCGCAAACAATCGTCTGCTTTCAGCACTCAGTGCTTTGCCGGTTCGCACCTTACATGA 5105 | || ||| | || || |||||| ||| | ||||| ||| | |||||||||||||| | Sbjct 154 CTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCA 213 Query 5106 GGTACATTGAGAAGAAATTGCATGAGGTGCTACCCAAGAAGTACTATATGCATTCAGGCA 5165 |||| || ||| | || | |||| | | || |||||| ||| || ||| || | Sbjct 214 GGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTA 273 Query 5166 AGGGTCTAGAAGAGTTGAATGATTGGGTGCTCAAGTCAAAGTTCACAGGCGTGTGCACAG 5225 |||| | || ||| | ||||| ||||| || || ||| ||| || ||||| | Sbjct 274 AGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGG 333 Query 5226 AATCAGACTACGAGGCCTTTGATGCCAGCCAAGATCAATACATAGTGGCATTTGAGATAT 5285 |||||||||| || || |||||||| || ||||||||||| |||| ||||| || Sbjct 334 AATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATCG 393 Query 5286 GCTTAATGAGATACTTGGGACTTCCAAATGACTTGATTGAGGATTACAAATACATCAAGA 5345 | | ||| || |||| | |||| || ||| | | || || | | || |||| Sbjct 394 CCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGA 453 Query 5346 CTCACTTGGGCAGCAAGTTGGGGAACTTCGCGATAATGCGATTTTCAGGAGAAGCGAGCA 5405 | ||| | || || ||||||| || ||||| ||| |||| || || ||||| || | Sbjct 454 CCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTA 513 Query 5406 CCTTCTTGTTCAATACCATGGCTAATATGCTCTTTACCTTCTTGAGGTATGACCTATCTA 5465 | || | |||||||| | |||||||||||||| || || | | ||||||| || | Sbjct 514 CATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTG 573 Query 5466 GCAGTGCTTGCATTTGCTTCGCGGGGGATGACATGTGCAGCAACCAGAACTTGAGGGTGT 5525 | | | | |||||||| || || ||||||||||| || || | || |||| | Sbjct 574 GAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAATCAAAGACTGCGGGTTT 633 Query 5526 CCAAAGAGCATGAGAAGTTTCTCG-GTAAGCTGAAGTTGAAGGCAAA----GGTCCAAAA 5580 | ||| ||||| | |||||| | | |||||| | || || || ||| | | Sbjct 634 CAGCAGAACATGA-AGGTTTCTTGAATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACA 692 Query 5581 GACCACGAACCCGACTTTTTGCGGCTGGAGTCTCACGAAGGATGGCATTTTCAAGAAGCC 5640 || || || |||||||| ||||||| || ||| | |||||||||| ||||| || Sbjct 693 GA----AAAACCAACTTTTTGTGGCTGGAACCTGACGCGGTATGGCATTTTTAAGAAACC 748 Query 5641 CCAACTGGTGTACGAGAGGATG-TGTATTGCCAAGGAGACCAACAATCT-GCACAATTGT 5698 ||| || | || | |||| || ||||| || |||| || || ||| |||| Sbjct 749 CCAGCTCATACTTGA-AAGATGCTGCATTGCAAAAGAGAGGAATGTGCTAGCA-GATTGC 806 Query 5699 ATTGACAATTACGCCATCGAAGTGTCTTATGCCTACAAGCTTGGAGAGA---GGGTGAAA 5755 || || ||||||||||| ||| | |||||||||||| | || ||| | || Sbjct 807 ATCGATAATTACGCCATTGAACTTGGGTATGCCTACAAG--TTGAAAGAACTCGCTGTGT 864 Query 5756 GAGTACATGGATGAGG-AGGAGCTGGAAGCAATGTACAATTGTGT---GCGTGTCATTGT 5811 | | | |||||||||| || |||| |||||| | | ||| ||||| ||||| | Sbjct 865 GTG-AGATGGATGAGGAAGAAGCT-GAAGCATTCTTCAACTGTGTTAAAATTGTCA---T 919 Query 5812 GAAGAATAAGCACTTGCTAAAGTCTGATGTTAGT 5845 ||||||||||| | ||||||||||||||| || Sbjct 920 AAAGAATAAGCATCTCCTAAAGTCTGATGTTCGT 953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26752699442816