Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_009892.1 Length=9005 Score E Sequences producing significant alignments: (Bits) Value seq74459 239 3e-59 >seq74459 Length=1629 Score = 239 bits (264), Expect = 3e-59 Identities = 427/618 (69%), Gaps = 8/618 (1%) Strand=Plus/Plus Query 5471 GATTTTGAAGAGAAGAA-ACT-CAGCAAGAGTGCTGCAACCATTGAAAACCATTCAGGGC 5528 || || ||||| ||||| ||| || || |||||||| | |||||||||||| | || | Sbjct 3 GACTTCGAAGATAAGAAGACTTCA--AAAAGTGCTGCCATAATTGAAAACCATGCTGGCC 60 Query 5529 GTTCTAGCAGGGATTGGCCAGTCGACAAAGCACTAATTTTCATGAAATCCCAACTCTGCA 5588 |||| | || |||||| |||| ||| | ||||||||||||| ||| | |||| Sbjct 61 GTTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCA 120 Query 5589 CTAAGTTTGACAATCGGTTTCGAAGTGCAAAGGCTGGGCAAACCTTGGCTTGTTTTCAGC 5648 | || ||||| ||||| ||| | ||| ||||||| ||| | | | || ||| | Sbjct 121 CGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTC 180 Query 5649 ACTCTGTCTTGTGTAGGTTTGCCCCCTACATGAGGTATATTGAGGCCAAGCTTTTCAATG 5708 || | || | || || || || || ||||| |||||||| ||| ||| | | | | Sbjct 181 ACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGG 240 Query 5709 CACTCCCAGACAGATTCTACATCCATTCAGGTAAGAATATTGATGACCTCGGGAACTGGG 5768 | | || || | |||||||||||| |||||| | || || || | |||| Sbjct 241 CGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGG 300 Query 5769 T--TAAGAAGCAAAATTTTTCAGGTGAGTGTACTGAATCAGACTATGAGGCCTTTGATGC 5826 | | | | || ||| ||||| || || |||||||||||||| || |||||||| Sbjct 301 TCCTTCGTGGTAA--TTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGC 358 Query 5827 TTCTCAAGATCACTTCATCCTTGCATTTGAAATAGAAATTATGAGGCACCTTGGACTCCC 5886 || || ||||| | |||| | || |||||||| | | ||| | | || || |||| Sbjct 359 ATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCC 418 Query 5887 TGAGGGTTTGATCAATGATTACATATTCATTAAGTGCAATCTTGGCTCCAAGTTAGGTTC 5946 || |||| | || || || || || |||||| | | || || || || | || Sbjct 419 AAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAA 478 Query 5947 TTTTGCAATAATGAGGTTCACTGGTGAGGCTAGCACATTTCTTTTCAACACCATGGCTAA 6006 |||||| || ||||| ||| | || || || || |||||||| ||||| || | ||||| Sbjct 479 TTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAA 538 Query 6007 TATGCTCTTTACGTTTCTTCGTTATGAGCTTAGTGGTCATGAAAGCATTAGCTTCGCCGG 6066 ||||||||| || |||||| ||||| | ||||| | || || ||| |||| || || Sbjct 539 TATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGG 598 Query 6067 TGATGACATGTGTGCAAA 6084 |||||||||||||| || Sbjct 599 AGATGACATGTGTGCGAA 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28674111054328