Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_010305.1 Length=8412 Score E Sequences producing significant alignments: (Bits) Value seq74459 358 4e-95 >seq74459 Length=1629 Score = 358 bits (396), Expect = 4e-95 Identities = 656/955 (69%), Gaps = 11/955 (1%) Strand=Plus/Plus Query 5003 GATTGGCTGATGGATGTGGGCTTGGTCTTCTCCAAATCTCAACTGTGCACGAAGTTCGAC 5062 || |||| || ||| |||||||| ||| ||||| ||| |||||||||| || || Sbjct 72 GACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAA 131 Query 5063 AATCGATTCAGGGATGCAAAGGCAGCGCAGACGATTGTGTGCTTTCAACATTCAGTTCTC 5122 |||||||| |||||||| ||||| || || |||| ||||||||| || | || ||| Sbjct 132 AATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTC 191 Query 5123 TGCCGTTTTGCACCTTACATGCGTTACATCGAGAAGAAACTCATGGAGGTACTCCCCAGG 5182 ||| | || ||||||||||| | || |||||| | || | ||||||| | || | Sbjct 192 TGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAG 251 Query 5183 CAGTATTATATACACTCTGGTAAGGGTCTGGATGAATTGAACGCATGGGTCAAAGAAGGA 5242 ||| || || || ||||||||| |||| || | || | |||||| || Sbjct 252 AAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGT 311 Query 5243 AAATTTGAGGGTGTTTGTACTGAGTCGGATTACGAAGCTTTCGATGCGAGTCAGGATCAA 5302 || || | |||||||| || || || || || ||||| || ||||| ||||||||| Sbjct 312 AATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAA 371 Query 5303 TATATAGTGGCCTTTGAGGTGAATGTGATGCGGTATCTGGGCATACCTAATGATGTGATC 5362 || || |||| ||||| | ||||| ||||||||| || || | ||| || | Sbjct 372 TACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTG 431 Query 5363 AACGACTACGTGTTCATCAAGACGCACCTGGGTTCGAAATTGGGGAATTTCTCCATTATG 5422 || ||||| | || || ||||| ||||| ||||| ||| |||||||||| | |||||| Sbjct 432 AAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATG 491 Query 5423 AGATTCTCTGGTGAAGCAAGCACCTTTCTGTTTAACACAATGGCCAATATGCTTTTCACA 5482 |||||||| || |||||||| || ||||| || || || | || |||||||| ||||| Sbjct 492 AGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACT 551 Query 5483 TTCCTGAGATATAGCATAAAAGGTAACGAGTACATTTGCTTCGCCGGGGACGATATGTGT 5542 || || | ||| | ||| || || ||| |||||||| || || || || |||||| Sbjct 552 TTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGT 611 Query 5543 GCAAACACCAGGCTGCACATCTCAAAAGAACATGAGAGCTTCTTGGGCAAATTGAAGCTG 5602 || || || |||| | ||| ||||||||| | |||||| | ||||||| Sbjct 612 GCGAATCAAAGACTGCGGGTTTCAGCAGAACATGAAGGTTTCTTGAATTTACTGAAGCTA 671 Query 5603 AAGGCAAAGGTAGACAACACAAATCACCCGACCTTTTGCGGGTGGAACCTCA-GCGCTCA 5661 || || || || | ||| | | || || ||||| || |||||||| | ||| | | Sbjct 672 AAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCTGACGCGGT-A 730 Query 5662 TGGCATATTCAAGAAGCCACAGTTAGTATTTGAGAGATTGTGCATAGCCAAGGAAACCAA 5721 |||||| || ||||| || ||| | || |||| |||| ||||| || || || | || Sbjct 731 TGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCTGCATTGCAAAAGAGAGGAA 790 Query 5722 CAACCTGGGCAACTGCATAGACAATTATGCCATTGAAGTTTCCTTCGCGTACAAGATGGG 5781 || | | ||||| || ||||| ||||||||| || | || |||||| || Sbjct 791 TGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACTTGGGTATGCCTACAAGTTGAA 850 Query 5782 AGAATTGGCCATACAACAAATGAATGAGGAAGAGGTGGACGCTTTTTATAACTGTGTGCG 5841 |||| | || | | ||| |||||||||| | || || || | |||||||| Sbjct 851 AGAACTCGCTGTGTGTGAGATGGATGAGGAAGAAGCTGAAGCATTCTTCAACTGTGTTAA 910 Query 5842 TGTGATAATTAAATACAAACACCTCCTCAAGTCTGACG-TGGTAAACGTCTTCTCAAGCG 5900 | | || || | || || ||||| |||||||| | | ||||| | | |||| Sbjct 911 AATTGTCATAAAGAATAAGCATCTCCTAAAGTCTGATGTTCGTAAA--TTGTACGAAGCA 968 Query 5901 GTTTGATGTAGTAGCTTAGGTGAACGCTAGTTTA-----GATTGTATATGGATGT 5950 | | || |||||||||| |||||||||| |||| | ||||||||| Sbjct 969 TCATAAGGT-CTAGCTTAGGTTCGCGCTAGTTTAGTTTTGATTATTTATGGATGT 1022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26778275637312