Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_011525.1 Length=7890 Score E Sequences producing significant alignments: (Bits) Value seq74459 253 1e-63 >seq74459 Length=1629 Score = 253 bits (280), Expect = 1e-63 Identities = 494/717 (69%), Gaps = 12/717 (2%) Strand=Plus/Plus Query 4560 TGCACCAAATGGGACAACAGAATGCGGGTAGCTAAAGCAGCACAAACGATTGTTTGCTTT 4619 ||||| |||| || || || | ||| ||||| || |||||| |||| || |||||| Sbjct 117 TGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTT 176 Query 4620 CAACATGCCGTCTTGTGCCGCTTTGCTCCCTACATGAGGTACATTGAAATGAAGCTGAAA 4679 || ||||| | ||| | || || || ||||| ||||| || || ||| | | Sbjct 177 TCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATG 236 Query 4680 GAAGTGCTGCCGGCTCGGTTTTACATTCATAGTGGCAAAGGTTTAGATGAGCTCAACTCT 4739 || | | |||| | ||| ||||| |||||||| || || || || ||||| || Sbjct 237 GAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAG 296 Query 4740 TGGGTTAAAGAAGGTAGGTTTGAGGGAGTGTGCACTGAGTCCGATTATGAGGCTTTTGAC 4799 ||||| |||| || | || || ||||| || || || ||||| || ||||| Sbjct 297 TGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGAT 356 Query 4800 GCTTCGCAGGACCAGTACATCGTCGCTTTTGAGTTGGCACTGATGAGGTACCTTAGGCTT 4859 || || ||||| || |||||| | |||||||| | || |||||| ||| || || | Sbjct 357 GCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATC 416 Query 4860 CCAAATGACCTGATTGAGGATTACAAGTACATAAAGACTCACTTGGGTTCCAAGCTGGGG 4919 |||| || || | | || || | | || ||||| ||| | ||||| || |||||| Sbjct 417 CCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGG 476 Query 4920 AATTTTGCAATCATGCGCTTCTCTGGTGAGGCCAGCACTTTTCTATTCAACACAATGGCA 4979 |||||||| || ||| | ||||| || || || || || ||||| ||||| || | || Sbjct 477 AATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCT 536 Query 4980 AACATGCTCTTCACCTTCATGCGGTATGAGCTTCA-TGGCGATGAGTACATTTGCTTTGC 5038 || ||||||||||| || | |||||| ||| | ||| | ||| ||||||||||| Sbjct 537 AATATGCTCTTCACTTTTCTTAAGTATGA-CTTAAGTGGAAAAGAGAGGATTTGCTTTGC 595 Query 5039 TGGTGATGACATGTGTTC--ATCAAAGAGATTGCGAATCAAGAAAACACATGAAAGCTTT 5096 || |||||||||||| | |||||||| | | ||| | | ||||| ||| ||| Sbjct 596 AGGAGATGACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCAGA--ACATG-AAGGTTT 652 Query 5097 CTTGGA-AAGCTGAAGTTGAAGGCTAAGGTGCAACACACTGAGAAGCCCACATTTTGTGG 5155 |||| | |||||| | || ||||| ||| || || || || || |||||||| Sbjct 653 CTTGAATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGG 712 Query 5156 CTGGAA-TTTATGTGCTGATGGAATATACAAGAAGCCACAGCTGGTCTTTGAGAGAATGT 5214 |||||| | | | | | |||| || | ||||| || ||||| | |||| ||| | Sbjct 713 CTGGAACCTGACGCGGT-ATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCT 771 Query 5215 GCATTGCCAAAGAGCTCAACAACCT-GCACAACTGCATCGATAATTACGCAATCGAA 5270 ||||||| |||||| || || ||| | ||||||||||||||||| || ||| Sbjct 772 GCATTGCAAAAGAGAGGAATGTGCTAGCA-GATTGCATCGATAATTACGCCATTGAA 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25109428946448