Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_011540.1 Length=8500 Score E Sequences producing significant alignments: (Bits) Value seq74459 262 2e-66 >seq74459 Length=1629 Score = 262 bits (290), Expect = 2e-66 Identities = 554/820 (68%), Gaps = 10/820 (1%) Strand=Plus/Plus Query 5017 GACAAGAAAACCTCAAAGAGCGCAGCAACTATTGAGAATCACTCTGGTCGTTCGTGCAGA 5076 || ||||| || ||||| || || || | ||||| || || |||| ||||| | Sbjct 12 GATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGTTCAAATCAA 71 Query 5077 GACTGGCTGATTGATACAGCGCAGATTTTCTCTAAGAGCCAACATTGCACAAAATTTGAC 5136 ||||||| || ||| || | ||||| || ||| ||||| |||||||| Sbjct 72 GACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAA 131 Query 5137 AATAGATTTAGGGTTGCAAAGGCGGCCCAAAGCATAGTGTGCTTCCAGCATGAGGTTCTG 5196 ||| ||||||||| ||| ||||| || ||| ||||||||||| || | || || Sbjct 132 AATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTC 191 Query 5197 TGTAGATTTGCCCCTTACATGCGGTACATTGAGAAAAAGCTCCACCAGGCTTTGCCAGAT 5256 || ||||| || |||||||| |||| || ||| ||||| | |||| ||||| || Sbjct 192 TGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAG 251 Query 5257 AAATTTTACATCCATTCTGGGAAAGGCTTAGAAGAATTGGATTGCTGGGTAAAGAAATAC 5316 || || ||||||||| ||| || || || || || | || ||||| Sbjct 252 AAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGT 311 Query 5317 AGATTCGACGGGGTCTGCACTGAGTCTGACTACGAAGCTTTTGATGCTTCGCAGGATCAA 5376 | ||| | || || ||||| || || ||||| ||||| |||||||| || ||||||||| Sbjct 312 AATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAA 371 Query 5377 TATATAGTTGCCTTTGAGGTCGCTGTGATGAACTATTTGGGACTTCCTAGAGATCTTGTG 5436 || || | || ||||| |||| ||||| | ||| |||| | || || ||| | ||| Sbjct 372 TACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTG 431 Query 5437 AGAGATTACCTGTACATTAAAACACACTTGGGTAGTAAATTGGGCAATTTTGCAATCATG 5496 | ||| || | | ||||| || ||| | ||| ||| |||| |||||||| || ||| Sbjct 432 AAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATG 491 Query 5497 CGTTTTTCTGGGGAGGCCAGTACCTTTCTGTTCAACACCATGGCAAACATGCTATTCACA 5556 | || || ||||| || ||||| ||||| ||||| || | || || ||||| ||||| Sbjct 492 AGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACT 551 Query 5557 TTCCTGCGGTACGACATTCGGGGGGATGAGGCCATCTGCTTTGCAGGTGATGACATGTGT 5616 || || ||| ||| | | || | ||| || ||||||||||| |||||||||||| Sbjct 552 TTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGT 611 Query 5617 GC--ATCAAGGAGATTACGCATCAGAGACGAGCACTCCCAATTCTTAGGAA--AGCTTAG 5672 || ||||| ||| | || | || || || ||||| ||| || | Sbjct 612 GCGAATCAA--AGACTGCGGGTTTCAGCAGAACATGAAGGTTTCTT--GAATTTACTGAA 667 Query 5673 ACTCAAAGCTAAAGTGCAATTTACCAATAAGCCTACATTTTGCGGGTGGAACCTCTGCCC 5732 || |||||||||||| ||||| | || || || ||||| || |||||||| | Sbjct 668 GCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCTGACGCG 727 Query 5733 TGATGGTATCTACAAGAAGCCACAACTGGTTCTCGAGCGTATG-TGTGTGGCTAAGGAGA 5791 |||| || | ||||| || || || | || || | ||| || | || || |||| Sbjct 728 GTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAG-ATGCTGCATTGCAAAAGAGA 786 Query 5792 ATAATAACTTGGCCAACTGTATCGATAATTACGCTATTGA 5831 ||| | || | || |||||||||||||| ||||| Sbjct 787 GGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGA 826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27059613776768