Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_012210.1 Length=8604 Score E Sequences producing significant alignments: (Bits) Value seq74459 320 9e-84 >seq74459 Length=1629 Score = 320 bits (354), Expect = 9e-84 Identities = 601/881 (68%), Gaps = 2/881 (0%) Strand=Plus/Plus Query 4960 AAGATTGGCTAATCGATCTAGGTTTGGTTTTTAGTAAGTCTCAACTCTGCACCAAATGGG 5019 |||| |||| |||||||| ||| |||||||| | || || ||| | ||||| |||| | Sbjct 70 AAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACGAAATTTG 129 Query 5020 GTAATAGGTTCATCAAAGCGAAGGCTGCACAGACTATAGTTTGTTTCCAACATGCTGTAC 5079 ||| | || | | || ||||||||||| | ||||| || || || || || | Sbjct 130 AAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGC 189 Query 5080 TTTGTAGGTTCGCCCCTTACATGCGTTACATCGaaaaaaaTCCTAGCGAGGCATTACCAA 5139 | || || ||||| |||||||| | || ||||| |||| | ||||| || || Sbjct 190 TCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTG 249 Query 5140 GAAACTTGTATATCCACTCTGGCAAGAGTCTGGAGGAACTTAATGAATGGGTAAAGGTCG 5199 || || || ||||| ||| ||| | ||||||| |||||||| ||||| | Sbjct 250 AGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTG 309 Query 5200 CCAAATTCGAGGGTATTTGCACTGAATCGGATTATGAGGCTTTTGATGCGTCTCAAGATC 5259 || ||| | ||| ||||||| ||||| || ||||| || |||||||| || || |||| Sbjct 310 GTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATC 369 Query 5260 ATTATATCATGGCGTTTGAGGTTAGCTTAATGCGATACCTTGGCTTACCAGTGGACCTCA 5319 | || |||||||| ||||| | | | ||| || || || | ||| ||| | Sbjct 370 AATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGG 429 Query 5320 TAGAGGATTACAAGTTCATCAAAACTCATCTCGGTTGCAAGTTAGGAAACTTCGCTATCA 5379 | | || || | || || || || || ||||||| || | || || || || || | Sbjct 430 TGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTA 489 Query 5380 TGCGCTTCTCCGGAGAAGCTAGCACTTTCCTGTTCAATACCATGGCGAACATGCTTTTCA 5439 || | |||||||| ||||| || || || || |||||||| | || || ||||| |||| Sbjct 490 TGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCA 549 Query 5440 CATTTCTCAGGTATGATTTGAATGGATCGGAATACATATGCTTCGCAGGTGATGACATGT 5499 | ||||| | |||||| || | |||| || || ||||| ||||| |||||||||| Sbjct 550 CTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGT 609 Query 5500 GTGCCTCTAAAAGATTGCGCGTGAGTGATAAATTCGAGGGTTTCCTGAGCAAACTCAAGT 5559 |||| | ||||| |||| || | || || |||||| ||| ||| ||| Sbjct 610 GTGCGAATCAAAGACTGCGGGTTTCAGCAGAACATGAAGGTTTCTTGAATTTACTGAAGC 669 Query 5560 TGAAGGCAAAGGTGGATTTTGTGGCTAGCCCCACTTTTTGTGGTTGGAACTTGGTTAATT 5619 | || || || |||| |||| | | || ||||||||||| |||||| || | Sbjct 670 TAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCTGACGCGGT 729 Query 5620 TCGGCATATACAAGCTTCCACAGCTAGTTTTCGAGCGTATG-TGTATAGCAAAAGAGAGA 5678 ||||| | ||| || ||||| | | || | ||| || || ||||||||||| Sbjct 730 ATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAG-ATGCTGCATTGCAAAAGAGAGG 788 Query 5679 AACATTCTAGCTGATTGTATTGATAATTATGCTATTGAAGTGTCTTATGCCTACAAGTTA 5738 || | ||||| ||||| || |||||||| || |||||| | |||||||||||||| Sbjct 789 AATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACTTGGGTATGCCTACAAGTTG 848 Query 5739 GGGGAACTTGCCACAAATCACATGGATGAGGAAGAGATGGAAGCTTTCTACAACTGCGTG 5798 ||||| || | | |||||||||||||| ||||| |||| |||||| || Sbjct 849 AAAGAACTCGCTGTGTGTGAGATGGATGAGGAAGAAGCTGAAGCATTCTTCAACTGTGTT 908 Query 5799 AAGGTCATTATCAAGAATATGCACATCATGAAATCTGACGT 5839 || | | || ||||||| ||| || | || ||||| || Sbjct 909 AAAATTGTCATAAAGAATAAGCATCTCCTAAAGTCTGATGT 949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27392104305216