Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_013527.1 Length=8662 Score E Sequences producing significant alignments: (Bits) Value seq74459 251 4e-63 >seq74459 Length=1629 Score = 251 bits (278), Expect = 4e-63 Identities = 377/533 (71%), Gaps = 12/533 (2%) Strand=Plus/Plus Query 5171 GGTTTGGTTTTCCTGAAGTCACAGCACTGCACAAAATTCGACAACAGATTCAGGGACGCT 5230 || ||||||||| |||| ||||| ||||| ||||| || || |||| ||||| ||| Sbjct 90 GGCTTGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCT 149 Query 5231 AAAGCCGGTCAGTCCATAGTCTGCTTCCAGCATTCAGTACTCTGTCGGCTGGCGCCTTAC 5290 || || | || || ||||| ||||| || | || ||||| | | || |||||| Sbjct 150 AAGGCTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTAC 209 Query 5291 ATGCGGTACATTGAGATGAAGGTGAATGAAGTGCTCCCTGAGAATTTCTACATCCACTCA 5350 || |||| || ||| ||||| | || | | | |||||||| ||||||||||| Sbjct 210 ATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGT 269 Query 5351 GGCAAGGGTTTAGATGAG-TTAAGCACATGGGT-----GAGGAAATACTCATTTGAGGGG 5404 || ||||| || || ||| |||| | ||||| | || ||| || | || Sbjct 270 GGTAAGGGGTTGGAGGAGCTTAATGAG-TGGGTCCTTCGTGGTAAT-----TTCCAAGGT 323 Query 5405 GTCTGCACAGAATCTGATTATGAAGCGTTCGATGCAAGCCAAGACCAATACATTATGGCA 5464 || ||||| ||||| || |||||||| || |||||| || || |||||||| ||||| Sbjct 324 GTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCT 383 Query 5465 TTTGAACTAGCGCTCATGAAATATCTGTTACTACCTGAAGATTTGATCAATGATTACATA 5524 |||||| | || || ||| | |||||| | || |||||| | || || || || Sbjct 384 TTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATT 443 Query 5525 TTCATAAAGACCCACCTTGGCTCCAAAATCGGGAACTTTGCTATAATGAGATTTTCTGGT 5584 || || ||||||||||| || || ||| | ||||| ||||| || |||||||| || || Sbjct 444 TTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGG 503 Query 5585 GAGGCAAGTACCTTTTTGTTCAACACACTTGCGAACATGTTATTTACCTTCTTGAAGTAT 5644 || |||||||| ||| | ||||| || || || || ||| | || || || | |||||| Sbjct 504 GAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTAT 563 Query 5645 GATTTGAAAGGTAACGAGGCCATTTGTTTTGCCGGGGATGATATGTGTGCTAA 5697 || || | || || ||| ||||| ||||| || ||||| |||||||| || Sbjct 564 GACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAA 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27577531715312