Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_014730.1 Length=8127 Score E Sequences producing significant alignments: (Bits) Value seq74459 228 4e-56 >seq74459 Length=1629 Score = 228 bits (252), Expect = 4e-56 Identities = 498/740 (67%), Gaps = 12/740 (2%) Strand=Plus/Plus Query 4718 CAAATTTGTACTAAGTTTGACAATAGATTCAGGTCTGCTAAGGCAGCCCAGAGTATTGCC 4777 ||| | || || || ||||| ||| |||| ||| ||||||||| || || || | Sbjct 111 CAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTG 170 Query 4778 TGCTTTCAGCATTCTGTTCTCTGCAGATTTGCTCCATATATGAGGTATATTGAGAAGAAA 4837 |||||| || | || ||||||||||| || || || || |||||||| ||| | || Sbjct 171 TGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAG 230 Query 4838 TTGCATGAAGTTCTCCCAGCTCGATATTACATCCATTCTGGGAAGAGCCTGGAACAACTC 4897 | || | | || | | ||||||||| ||| ||| | |||| | || Sbjct 231 GTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTT 290 Query 4898 AATGAATGGGTTCTTAAAGGGCAGTTCAATGGGGTGTGTACGGAATCTGATTATGAAGCT 4957 ||||| ||||| ||| || | ||| | || || || |||||||| || |||||||| Sbjct 291 AATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCA 350 Query 4958 TTTGATGCCTCGCAAGATCAGTACATAGTAGCCTTTGAGCTAGAGTTGATGAAGTACTTG 5017 |||||||| || || ||||| ||||| | || ||||| | | ||||| |||| || Sbjct 351 TTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTG 410 Query 5018 GGCCTGCCAAATGATTTGATTCAAGATTACACCTACATTAAGACTCACTTGGGTTCCAAA 5077 || | |||| |||||| | |||| || | | |||||||| ||| | ||||| ||| Sbjct 411 GGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAA 470 Query 5078 TTAGGAGGCTTTGCGATAATGAGGTTTACTGGAGAAGCCAGCACATTTCTTTTCAACACT 5137 | || |||||||| ||||| || | || ||||| || |||||||| ||||| || Sbjct 471 CTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACG 530 Query 5138 CTGGCTAACATGCTTTTTACTTTCCTAAGATATGAGATTAAAGGTAATGAATACATATGT 5197 || ||||| ||||| || ||||| || | ||||| | | || || || || || Sbjct 531 CTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGC 590 Query 5198 TTCGCTGGAGATGACATGTGTTC-ATCCAAGAGATTGGTCATTAAAAAAGAGCATGAAGG 5256 || || ||||||||||||||| | | ||| ||| || || | ||| |||||||| Sbjct 591 TTTGCAGGAGATGACATGTGTGCGAATCAA-AGACTGCGGGTTTCAGCAGAACATGAAGG 649 Query 5257 ATTTCTGAAGAAAATTAAATTGAAAGCAAA----GGTTCAACATACCTCCAAACCAACTT 5312 || |||| | | || | ||||| || |||| ||| | |||||||||| Sbjct 650 TTTCTTGAATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGA----AAAACCAACTT 705 Query 5313 TCTGTGGTTGGCATTTAAGTCCAGATGGAATCTACAAGAAACCTCAATTGGTATTTGAGA 5372 | ||||| ||| | | | | |||| || | |||||||| || | || |||| | Sbjct 706 TTTGTGGCTGGAACCTGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGA-A 764 Query 5373 GGATG-TGCATAGCCAAAGAAACAAATAATCTTCATAATTGCATAGACAGCTACGCCATA 5431 |||| ||||| || ||||| | ||| || ||||||| || | |||||||| Sbjct 765 AGATGCTGCATTGCAAAAGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATT 824 Query 5432 GAGGTGTCTTATGCATACAA 5451 || | ||||| ||||| Sbjct 825 GAACTTGGGTATGCCTACAA 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25867123708392