Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_014821.1 Length=9311 Score E Sequences producing significant alignments: (Bits) Value seq74459 291 5e-75 >seq74459 Length=1629 Score = 291 bits (322), Expect = 5e-75 Identities = 440/619 (71%), Gaps = 5/619 (1%) Strand=Plus/Plus Query 5628 CTTTGAAGAGAAAAA-ACTCTCAAAGAGTATGGCCACTATTGAGAACCATTCTGGTCGTT 5686 ||| ||||| || || ||| ||||| ||| |||| ||||| |||||| |||| |||| Sbjct 5 CTTCGAAGATAAGAAGACT-TCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGTT 63 Query 5687 CCTGTGAGGATTGGCCAATCGATAAAGCTTTGATATTCATGAAGTCTCAATTGTGCACGA 5746 | | | || |||||||||||| ||| ||| | |||||||| || ||||||||||||| Sbjct 64 CAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACGA 123 Query 5747 AATTTGACAACAGATTCCGAAGTGCCAAGGCCGGACAAACTTTAGCTTGCTTTCAACATT 5806 ||||||| || |||| | ||| ||||| | |||| | ||| |||||| || Sbjct 124 AATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCACG 183 Query 5807 CTGTCTTGTGCAGATTTGCCCCTTATATGAGATACATAGAAGCAAAAG-TGGTGGAGTCA 5865 | || | |||||||| || ||||| || || || || || ||||||| | ||||| | Sbjct 184 CCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGA-GCAAAAGGTAATGGAGGCG 242 Query 5866 CTCCCAAAAAATCTCTACATTCACTCTGGGAAGAATATTGATGATCTGGCATCCTGGGTC 5925 | || | || ||||||| || ||| ||| | || || || |||||| Sbjct 243 TTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTC 302 Query 5926 AGAATTCACAAATTCAATGGTGTGTGTACAGAATCTGACTACGAGGCTTTTGATGCATCA 5985 | || ||| | ||||| || || ||||| ||||| || || |||||||||||| Sbjct 303 CTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCA 362 Query 5986 CAGGACCACTTCATTCTGGCCTTTGAATTGGAAGTCATGAAATATCTTGGTTTGCCAGCA 6045 ||||| || | ||| |||| |||||| | | | ||| | ||||| || | ||| Sbjct 363 CAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGG 422 Query 6046 GATTTGATTTCAGATTACACATTCATCAAAACTCACCTTGGGTCAAAACTTGGTAATTTT 6105 |||||| | ||| || | || || || || ||||| || |||||||| || |||||| Sbjct 423 GATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTT 482 Query 6106 GCCATAATGCGATTCACTGGTGAAGCCAGCACTTTTCTATTCAATACCATGGCTAATATA 6165 || || ||| ||||| | || ||||| || || ||||| |||||||| | |||||||| Sbjct 483 GCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATG 542 Query 6166 CTATTCACCTTTTTGAGGTATGACCTTAACGGAAAGGAGGCAATTTGTTTCGCTGGTGAT 6225 || ||||| ||| | | ||||||| | | ||||| ||| ||||| || || || ||| Sbjct 543 CTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGAT 602 Query 6226 GACATGTGTGCAAACTCAA 6244 ||||||||||| || |||| Sbjct 603 GACATGTGTGCGAA-TCAA 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29652400493800