Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_015220.1 Length=7241 Score E Sequences producing significant alignments: (Bits) Value seq74459 118 5e-23 >seq74459 Length=1629 Score = 118 bits (130), Expect = 5e-23 Identities = 205/296 (69%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 4947 AGGTTTTTGTATAGAATCAGATTATGAAGCTTTTGATGTTTCTCAGGATCATAACGTTTT 5006 |||| |||| | |||||||| |||||||| ||||||| || |||||||| || | | Sbjct 320 AGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCAT 379 Query 5007 GGCATTTGAAGTTCAGTTGATGGAACATATGTTGATTCCAGAAGGGATAA--TCAATGAT 5064 ||| |||||| | ||||||| || || ||| ||| |||||| | || || Sbjct 380 GGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCA--AGGGATTTGGTGAAAGAC 437 Query 5065 TACATCAAAATGAAAACCGAATTGGGATGCAAGCTTGGGAATTTTGCCATTATGAGATTC 5124 || || || || ||| | | || | || || ||||||||||| |||||||||||| Sbjct 438 TATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTC 497 Query 5125 ACCGGGGAGTTCTGCACATTCCTCTTTAATACCTTCTGCAATATGGCATTTACCTTTCTG 5184 ||||||| | ||||| ||||| ||||| || |||||| || || ||||| Sbjct 498 TCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTT 557 Query 5185 AGGTATGAAATGCAAGGGAATGAACCAGTCTGTTTTGCCGGTGATGACATGTGTGC 5240 | |||||| | || || || | || ||||| || |||||||||||||| Sbjct 558 AAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGC 613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23034560167960