Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_015782.1 Length=7275 Score E Sequences producing significant alignments: (Bits) Value seq74459 118 5e-23 >seq74459 Length=1629 Score = 118 bits (130), Expect = 5e-23 Identities = 205/297 (69%), Gaps = 6/297 (2%) Strand=Plus/Plus Query 4912 AGGTTTTTGCATTGAATCAGATTATGAGGCATTCGATGTTTCCCAGGATCAAAATGTACT 4971 |||| |||||| |||||||| ||||| ||||| |||| || ||||||||| | | | Sbjct 320 AGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCAT 379 Query 4972 TGCATTTGAGGTTCAACTGATGGAACATATGAGAATCCC---GGAGTGTGTGATTTCTGA 5028 || ||||| | |||||||| || || | ||||| ||| | |||| || Sbjct 380 GGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAA---GA 436 Query 5029 TTATATTCGTATGAAGACCGAATTGGGATGCAAATTGGGAAATTTTGCCATAATGAGATT 5088 |||||| ||| |||||| | | || | ||| |||| |||||||| || |||||||| Sbjct 437 CTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATT 496 Query 5089 TACAGGGGAATTCTGCACATTTCTCTTCAACACCTTTTGTAACATGGCATTCACTTTCAT 5148 | |||||| | |||||||||||||| || | ||| ||| |||||||| | Sbjct 497 CTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCT 556 Query 5149 GAGATATCAGATGTCAGGGCATGAACCCATTTGTTTTGCAGGTGATGACATGTGTGC 5205 | ||| | | || | || ||||| |||||||| |||||||||||||| Sbjct 557 TAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGC 613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23143258994568