Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_018175.1 Length=8410 Score E Sequences producing significant alignments: (Bits) Value seq74459 311 5e-81 >seq74459 Length=1629 Score = 311 bits (344), Expect = 5e-81 Identities = 574/830 (69%), Gaps = 14/830 (2%) Strand=Plus/Plus Query 5051 CAAATATGCACTAAATTTGATAATAGGTTCAGGGATGCCAAGGCGGCACAAACTATCGTG 5110 ||| | ||||| |||||||| ||| | || |||||||| ||||| |||||| | || ||| Sbjct 111 CAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTG 170 Query 5111 TGTTTCCAACATGCAGTGCTATGCAGATTTGCTCCATACATGCGGTACATTGAAAAGAAG 5170 || || || || ||||| |||||||| || || ||||| |||| || || | ||| Sbjct 171 TGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAG 230 Query 5171 CTGCATGAGGTTCTGCCCAAGAAGTATTACATTCACTCTGGAAAGGGGCTTGACGAGCTA 5230 | |||| |||| |||||| ||||| || ||| |||||| | || ||||| Sbjct 231 GTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTT 290 Query 5231 AACAATTGGGTCATTGAGGGGCAGTTTGAGGGCTGTTGCACAGAGTCCGACTATGAAGCA 5290 || | |||||| || || | || | || |||||| || || |||||||||||| Sbjct 291 AATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCA 350 Query 5291 TTCGATGCTTCGCAGGACCAGTACATCATGGCTTTTGAGATAGAAATAATGAAGTACTTG 5350 || ||||| || ||||| || ||||||||||||||||| || | | ||| |||| || Sbjct 351 TTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTG 410 Query 5351 GGACTGCCCCGGGACTTGATAGCTGATTACCAGTACATCAAGACACACCTAGGGTCTAAG 5410 || | || |||| ||| | || || | || ||||| ||||| || || || Sbjct 411 GGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAA 470 Query 5411 CTAGGCAACTTTGCAATAATGAGGTTCTCGGGCGAGGCCAGTACCTTCCTGTTCAATACT 5470 || || || ||||| || ||||| ||||| || || || ||||| || || |||||||| Sbjct 471 CTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACG 530 Query 5471 ATGGCAAACATGCTGTTCACCTTCATGAGGTATGAGATAAAGGGCAATGAGTACATATGC 5530 | || || ||||| ||||| || | | |||||| ||| || || ||| || ||| Sbjct 531 CTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGC 590 Query 5531 TTCGCAGGTGACG--ATATGTGCTCATCCAAGAGGTTGCAGG--TCAGCAGGGTGCATGA 5586 || ||||| || | || ||||| ||| |||| ||| || |||||| | ||||| Sbjct 591 TTTGCAGGAGATGACATGTGTGCGAATCAAAGA--CTGCGGGTTTCAGCA--GAACATGA 646 Query 5587 GGCTTTTCTGGGTAAGTTGAAGTTAAAAGCAAAAGTGCAGCACACTTCAAAGCCCACCTT 5646 | ||| || | ||||| ||||||| |||||| || ||| || || || Sbjct 647 AGGTTTCTTGAATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTT 706 Query 5647 CTGCGGGTGGAATTTG-TGCGCTGATGGAATTTACAAAAAACCTCAGTTGGTCCTCGAGC 5705 || || ||||| || ||| | |||| |||| || ||||| ||| | | || || Sbjct 707 TTGTGGCTGGAACCTGACGCGGT-ATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAA 765 Query 5706 GCATG-TGCATAGCAAAAGAGACTGATAATCT-GCGGAACTGTATAGATAATTATGCCAT 5763 | ||| ||||| |||||||||| || || || | | || || |||||||| ||||| Sbjct 766 G-ATGCTGCATTGCAAAAGAGAGGAATGTGCTAGCAG-ATTGCATCGATAATTACGCCAT 823 Query 5764 CGAAGTTGCCTTTGCGTACAAATTGGGTGAACGCGCTGTGAACCGAATGGATGAGGAGGA 5823 ||| ||| | ||| ||||| ||| |||| ||||||| ||||||||||| || Sbjct 824 TGAACTTGGGTATGCCTACAAGTTGAAAGAACTCGCTGTGTGTGAGATGGATGAGGAAGA 883 Query 5824 GTTGGAAGCCTTCTACAACTGCGTGAGGATAATCGTGAAAAACAAGCATC 5873 ||||| |||| |||||| || | || || | || || ||||||| Sbjct 884 AGCTGAAGCATTCTTCAACTGTGTTAAAATTGTCATAAAGAATAAGCATC 933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26771881588688