Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_018448.1 Length=8857 Score E Sequences producing significant alignments: (Bits) Value seq74459 161 6e-36 >seq74459 Length=1629 Score = 161 bits (178), Expect = 6e-36 Identities = 351/523 (67%), Gaps = 2/523 (0%) Strand=Plus/Plus Query 5199 GTTTTTATGAAGTCACAGCACTGTACAAAGTTTGAAAACAGATTTAGAGATGCCAAAGCT 5258 ||||| ||||| ||||| || || || |||||||| ||||||| ||||| || ||| Sbjct 96 GTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCT 155 Query 5259 GCCCAAACTATTGTATGTTTTCACCACTCTGTACTTTGCAGGTTTGCTCCTTATATTAGG 5318 || ||| | || || || ||| ||| | || || ||||| || || ||||| || ||| Sbjct 156 GCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGG 215 Query 5319 TATATAGAGATGAAAGTCAAAGAAGTGCTACCATCCAATTTCTACATACACTCTGGATTG 5378 ||||| ||| || || | || | | | || || |||||||| || ||| | Sbjct 216 TATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAG 275 Query 5379 AGCATAGAA-AGCTTGGATGACTGGGTGAGGAGCAACGACTTTAATGGAGAATGCACAGA 5437 | | || ||||| |||| ||||| | | || | || | ||||| || Sbjct 276 GGGTTGGAGGAGCTTA-ATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGA 334 Query 5438 GTCCGACTATGAGGCTTTTGATGCAAGCCAAGATGAGTACACTCTAGCATTTGAGCTTGC 5497 || |||||||| || ||||||||| || ||| | |||| | || ||||| | || Sbjct 335 ATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATCGC 394 Query 5498 TTTGATGGAGTATTTGAAGCTGCCTAAGGATTTGATAAGTGATTACCGATTCATCAAATT 5557 ||||||||||| || | | || | ||||||| | | || || || || || Sbjct 395 CCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGAC 454 Query 5558 GCATTTGGGGTCCAAGCTAGGCATGTTTTCTGTTATGAGATTCACTGGAGAAGCCAGCAC 5617 || | || || || || || | ||| | ||||||||||| | || ||||| || || Sbjct 455 CCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTAC 514 Query 5618 CTTCTTGTTTAATACTCTGGCCAACATGTTGTTCACTTTTCTCCGCTATGATCTTAGAGG 5677 || | || ||||| || || || ||| | ||||||||||| ||||| | || || Sbjct 515 ATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGG 574 Query 5678 TAATGAATCTATCTGCTTTGCGGGAGATGACATGTGCGCTAAT 5720 || || || |||||||| |||||||||||||| || ||| Sbjct 575 AAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAAT 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28200951456152