Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_018714.1 Length=9266 Score E Sequences producing significant alignments: (Bits) Value seq74459 250 1e-62 >seq74459 Length=1629 Score = 250 bits (276), Expect = 1e-62 Identities = 571/851 (67%), Gaps = 14/851 (2%) Strand=Plus/Plus Query 5625 CTTTGAGGAGAAGAAGCTATCAAAAAGCATGGCTACAATCGAGAATCACTCAGGGAGGTC 5684 ||| || || |||||| |||||||| || | ||| || || || | || | || Sbjct 5 CTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGTTC 64 Query 5685 ATGTGAAGATTGGCCTGTTGATAAAGCTTTGATTTTCATGAAGTCCCAGTTGTGCACAAA 5744 | | |||| ||||| | ||| ||| ||| |||||||||| || || |||||||| || Sbjct 65 AAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACGAA 124 Query 5745 ATTTGATAATCGATTTAGAAGTGCAAAGGCTGGACAAACTCTGGCTTGTTTTCAACACTC 5804 |||||| ||||||||||| ||| ||||||| |||| | | | || ||| ||| | Sbjct 125 ATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCACGC 184 Query 5805 AGTTCTATGCAGATTTGCCCCCTATATGAGGTATATTGAGGCCAAGGTTTTTGAGGTTCT 5864 || || |||||||| || || || || |||||||| ||| ||||| | |||| | Sbjct 185 CGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTT 244 Query 5865 ACCCAAAAATCTCTATATTCATTCTGGGAAAAATATTGATGATTTAGCTGAGTGGGT-CA 5923 || | || |||| || ||| ||| || | || || | ||||||||| | Sbjct 245 GCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCT 304 Query 5924 CCGTCCATAAGTTCAATGGGATATGCACAGAATCAGATTATGAAGCATTTGACGCGTCAC 5983 ||| ||| ||| | || | ||||| |||||||| |||||||||||||| || |||| Sbjct 305 TCGT-GGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCAC 363 Query 5984 AGGACCACTTTATTCTTGCTTTTGAGTTGGAGGTCATGAAATTCCTTGGTCTTCCGCCCG 6043 |||| || | || | |||||||| | | | ||| | | || || | || | Sbjct 364 AGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGG 423 Query 6044 ACCTCATTGCTGATTACACTTTCATTAAAACCCATCTGGGTTCGAAGCTTGGCAATTTTG 6103 | | | || || | ||| ||||| ||||| || ||||| || || || ||||||| Sbjct 424 ATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTG 483 Query 6104 CAATCATGCGCTTTACTGGTGAAGCAAGCACTTTCTTGTTCAACACCATGGCAAACATGT 6163 | || ||| | || | || |||||||| || || | ||||| || | || || ||| Sbjct 484 CGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATGC 543 Query 6164 TATTCACCTTTCTTAGATATGATTTGAGTGGCAAGGAAGCTATCTGCTTTGCTGGTGATG 6223 | ||||| ||||||| ||||| || ||||| || || || |||||||| || |||| Sbjct 544 TCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATG 603 Query 6224 ACATGTGTGCAAATTCTAGATTGAAGG--TCACCAATGCAAATTCAAAATTTTTGGACAA 6281 |||||||||| ||| ||| || || ||| || | | || | || ||| | Sbjct 604 ACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCA--GAACATGAAGGTTTCTTGAATTT 661 Query 6282 GATTAAGCTGAAAGCTAAGGTTCAATTCACCGCAACACCAACTTTTTGCGGTTGG-GGTT 6340 | ||||| |||||||| || || || | || |||||||||||| || ||| | Sbjct 662 ACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCT 721 Query 6341 TATGTGAGCATGGAGTTTTCAAGAAGCCTGATCTTGTTCTTGAAAGATTACAGATAGCTC 6400 | | | | |||| |||| ||||| || | || | |||||||||| || || Sbjct 722 GACGCG-GTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCTGCATTGC-- 778 Query 6401 GGGAAACCAGGAAT---CTGGAGAACTGCATCGATAATTATGCTATTGAAGTTTCCTGTG 6457 || |||||| || | | |||||||||||||| || |||||| || | || Sbjct 779 -AAAAGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACTTGGGTATG 837 Query 6458 CTTATAAGATG 6468 | || ||| || Sbjct 838 CCTACAAGTTG 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29508534399760