Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_019025.1 Length=8328 Score E Sequences producing significant alignments: (Bits) Value seq74459 253 1e-63 >seq74459 Length=1629 Score = 253 bits (280), Expect = 1e-63 Identities = 489/718 (68%), Gaps = 5/718 (1%) Strand=Plus/Plus Query 5209 GAATTTGAAGAAAAGAAATGCTCAAAGAGTGCAGCTACAATTGAAAATCATTCTGCACGA 5268 || || ||||| ||||| ||||| ||||| || | ||||||||| ||| ||| || Sbjct 3 GACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGT 62 Query 5269 TCATGCAATGACTGGCTTTTAGA-CATCGCAAACATTTTCATGAAATCGCAATTGTGTTC 5327 ||| | ||||||| | || || || ||||||||||||| |||||||| | Sbjct 63 TCAAATCAAGACTGGCCAATCGATCAAGGCTTGG-TTTTCATGAAATCACAATTGTGCAC 121 Query 5328 CAAATTTGACAATAGGTGCATTGACAAGGCCAAAGCTGGCCAGACTCTTGCATGCTTTCA 5387 |||||||| ||| | | | || || || |||| || | | | |||||| Sbjct 122 GAAATTTGAAAATCGATTTAGGGAT---GCTAAGGCTGCACAATCGATAGTGTGCTTTTC 178 Query 5388 GCACTCTGTGTTATGTAGATTTGCACCTTATGTGAGATACATTGAAAAGAAATTATTTGA 5447 ||| | ||| | || ||||| |||||||| | || || || || | || || | || Sbjct 179 TCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGA 238 Query 5448 GGTGTTACCAAAAAATCTTTACATACACAGTGGCAAGAGCTTGGAGGAACTGGAAAAATG 5507 || ||| || | || | ||||| || ||||| ||| | |||||||| || | | || Sbjct 239 GGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTG 298 Query 5508 GGTTATGAATGGTTCATTCAATTCCGTGTGCACTGAGTCAGATTATGAAGCCTTTGATGC 5567 ||| | |||| ||| | || ||||| || ||||| |||||||| |||||||| Sbjct 299 GGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGC 358 Query 5568 AAGCCAGGATCATTTTATTGTCGCTTTTGAGTTAGAACTGATGAGATACTTGGGTTTGCC 5627 | |||||||| | || | |||||||| | | |||||| || |||| | || Sbjct 359 ATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCC 418 Query 5628 TAATGACCTGATTGAAGATTACAGGATGATTAAGGTAAAGCTTAGTTCAAAATTGGGCAA 5687 | || || | |||| || | | |||||| | || |||||||| |||| || Sbjct 419 AAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAA 478 Query 5688 TTTCGCGATAATGCGTTTCACAGGAGAGGCTTCAACTTTCTTATTCAATACCATGGCTAA 5747 ||| ||||| ||| | ||| | || || || || || | |||||||| | ||||| Sbjct 479 TTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAA 538 Query 5748 CATGCTCTTCACTTTTATGAAGTATGATTTGTCTGGCAAAGAATTTATTTGCTTCGCTGG 5807 ||||||||||||||| | |||||||| || ||| ||||| |||||||| || || Sbjct 539 TATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGG 598 Query 5808 TGATGACATGTGCGCTAACAAAAGACTAAGATTGTCTTCTGAGTATGATGGTTTCTTGAG 5867 ||||||||||| || || ||||||| | | || | || |||| |||||||||| Sbjct 599 AGATGACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCAGAACATGAAGGTTTCTTGAA 658 Query 5868 TAAGCTAAAGCTGAAAGCAAAAGTGCAGTTTACAAAAAGTCCTACCTTTTGCGGATGG 5925 | || ||||| ||||| |||||| |||||| ||| || || ||||| || ||| Sbjct 659 TTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGG 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26509725595104