Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_020996.1 Length=8397 Score E Sequences producing significant alignments: (Bits) Value seq74459 183 2e-42 seq41354 93.3 2e-15 >seq74459 Length=1629 Score = 183 bits (202), Expect = 2e-42 Identities = 416/619 (67%), Gaps = 10/619 (2%) Strand=Plus/Plus Query 5195 GATTTTGAAGAAAAGAAG-CTTCAGAAATCAATGGCAACGCTGGAGAATCATAGTGGCAG 5253 || || ||||| |||||| ||||| ||| || || || | || ||| |||| | Sbjct 3 GACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAA-AACCATGCTGGCCG 61 Query 5254 GTCAGATCCTGACTGGAGTGTTGAGAAAGCGTTAATTTTCATGAAGAGTCAGTTGTGCAC 5313 ||| ||| |||||| | || ||| || |||||||||| || |||||||| Sbjct 62 TTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCAC 121 Query 5314 GAAGTTTGATAATAGATTTAGGAACGCAAAAGCTGGTCAAACTTTAGCTTGCTTCCATCA 5373 ||| ||||| ||| |||||||| | || || |||| ||| | ||| ||||| ||| Sbjct 122 GAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCA 181 Query 5374 TGATGTGCTCTGTCGCCTTGCTCCGTACATTCGGTACATTGAGAAGAAAGTGTTCAAGGC 5433 | |||||||| | | || || ||||| |||| || ||| | || || | |||| Sbjct 182 CGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGC 241 Query 5434 TCTGCCTAGCAACCTTTATATCCACTCTGCACGCAAT---TTTGATGACCTTAGGGATTG 5490 ||||| || | || ||||| || | || || || || |||| || || Sbjct 242 GTTGCCTGAGAAGTTCTACATCCATAGTG---GTAAGGGGTTGGAGGAGCTTAATGAGTG 298 Query 5491 GGTTATAAAGAATAACTTCACTGGGGTTTGTACTGAGTCTGATTATGAGGCTTTTGATTC 5550 ||| | ||| ||| || ||||| || || || || ||||| || |||||| | Sbjct 299 GGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGC 358 Query 5551 TTCTCAAGATGTAAACATTTTGGCATTTGAGGTAAGCCTGATGGAGTATTTGAGACTGCC 5610 || || ||| | |||| |||| ||||| | ||||||||||||| || | | || Sbjct 359 ATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCC 418 Query 5611 CAGGGATTTGATTGAAGATTACAAGTACTTGAAATTCCACACTCACT-CAAAGCTTGGCC 5669 ||||||||| | |||| || | | | || |||| ||| | |||| || || Sbjct 419 AAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCAC-CTCGGTTCAAAACTGGGGA 477 Query 5670 AATTTGCTGTTATGAGATTCACCGGAGAGGCAGGAACCTTCCTGTTCAATACTTTGGCAA 5729 | ||||| ||||||||||| |||| || ||| | || || || |||||||| | || | Sbjct 478 ATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTA 537 Query 5730 ACATGGTCTTTACATTCATGAGGTATGAAATCAATGGAAGAGAGGCCATATGCTTTGCTG 5789 | ||| |||| || || | | |||||| | | ||||| |||| || |||||||| | Sbjct 538 ATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAG 597 Query 5790 GGGATGACATGTGCGCTAA 5808 | ||||||||||| || || Sbjct 598 GAGATGACATGTGTGCGAA 616 >seq41354 Length=320 Score = 93.3 bits (102), Expect = 2e-15 Identities = 121/165 (73%), Gaps = 3/165 (2%) Strand=Plus/Plus Query 4903 CAGGATTGACAATTTGGTCACTGAGCAGTTTTCAGAAGTTCA-CAAAGGCA--AAGGCAA 4959 ||| |||| ||| | |||| ||| |||||| | |||| ||| || ||| | | || || Sbjct 23 CAGAATTGGTAATGTTGTCAGTGATCAGTTTGCTGAAGATCATCACAGGAATCATGGGAA 82 Query 4960 AGTTCTAACTGCCGCACCTGATAACTTTGAAGCAATTTACCCAAGGCACAAAGCTGGTGA 5019 | |||| | ||| |||| || ||||||||||||||||| || ||||| ||||| Sbjct 83 GATCCTAAGTAACGCTGCTGAGCGTTTCGAAGCAATTTACCCAAGACATAAAGCCGGTGA 142 Query 5020 TACTGCAACATTTGTTATGGCTGCACGCAAGAGGTTAAAATTTTC 5064 |||||||| || ||||||||||| | ||| | ||| ||||| Sbjct 143 CACTGCAACGTTCATTATGGCTGCAAGGAAGCGCTTACGCTTTTC 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26730320272632