Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_024449.1 Length=8431 Score E Sequences producing significant alignments: (Bits) Value seq74459 179 2e-41 >seq74459 Length=1629 Score = 179 bits (198), Expect = 2e-41 Identities = 383/572 (67%), Gaps = 0/572 (0%) Strand=Plus/Plus Query 5266 GAGAACCACAGTGGACGTTCAGACCCAGACTGGGAAATTGAGAAGGCCTTAATTTTTATG 5325 || ||||| ||| |||||| | | ||||||| ||| || | | ||| |||| ||| Sbjct 45 GAAAACCATGCTGGCCGTTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATG 104 Query 5326 AAGAGCCAGTTGTGTACCAAATTTGATAATAGATTCAGGGATGCCAAGGCGGGCCAAACT 5385 || || ||||| || |||||||| ||| |||| |||||||| ||||| | ||| | Sbjct 105 AAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCG 164 Query 5386 TTGGCCTGTTTCCATCACAATGTTTTGTGCCGACTGGCCCCATACATTAGATACATTGAG 5445 | | || || |||| || | ||| || | || || ||||| || || || ||| Sbjct 165 ATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAG 224 Query 5446 AAGAAGGTCTTTGATGCCCTCCCAAGGAATTTGTACATCCATTCTGGAAAGAATTTTGAT 5505 | ||||| | || || | || ||| || ||||||||| ||| ||| || || Sbjct 225 CAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAG 284 Query 5506 GATCTCCGGGATTGGGTGATTAACAGTAATTTTTCTGGCATGTGCACTGAATCAGACTAT 5565 || || || ||||| || ||||||| || | ||||| |||||||||||| Sbjct 285 GAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTAT 344 Query 5566 GAGGCTTTTGACTCTTCACAGGATGCAAACATTTTGGCATTTGAAGTGAGTCTCATGAAT 5625 || || ||||| | ||||||||| | |||| |||| |||||| | || ||| | Sbjct 345 GAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAG 404 Query 5626 TATCTAAATTTGCCCAGGGATCTTATTGAGGATTACAAGCACTTGAAGTTCAACACCCAT 5685 ||||| | || |||||| | | | || || | | ||| | || | | Sbjct 405 TATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGT 464 Query 5686 TCAAAACTGGGTCAATTTGCTGTGATGAGGTTCACTGGCGAAGCTGGCACCTTCCTCTTC 5745 ||||||||||| | ||||| | ||||| ||| | || ||||| | || || |||||| Sbjct 465 TCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTC 524 Query 5746 AACACTCTGGCCAATATGGTGTTCACTTTCATGAGGTATGAAACTAATGGCCGAGAATCC 5805 || || || || |||||| | |||||||| | | |||||| | ||| ||| Sbjct 525 AATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGG 584 Query 5806 ATCTGTTTTGCTGGAGATGATATGTGTGCAAA 5837 || || ||||| |||||||| |||||||| || Sbjct 585 ATTTGCTTTGCAGGAGATGACATGTGTGCGAA 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26839019099240