Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_025388.1 Length=9409 Score E Sequences producing significant alignments: (Bits) Value seq74459 235 3e-58 >seq74459 Length=1629 Score = 235 bits (260), Expect = 3e-58 Identities = 556/840 (66%), Gaps = 0/840 (0%) Strand=Plus/Plus Query 5154 GAGACTTTGAGGAAAAGAAAACAAGCAAAAGTGCAGCTGTAATTGAAAATCATTCTGGTC 5213 ||||||| || || ||||| || |||||||| || |||||||||| ||| |||| | Sbjct 1 GAGACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCC 60 Query 5214 GTTCGTGCCGGGATTGGTTGGCCGATGTTGGTTTCATATTTATGAAGAGCCAGTTCTGTT 5273 |||| | || ||| |||| || || | || ||||| || || || Sbjct 61 GTTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCA 120 Query 5274 CCAAGTGGGACAACAGATTTAGGGATGCAAAGGCAGGGCAAACTTTAGCTTGCTTTCACC 5333 | || | || || ||||||||||||| ||||| | ||| | ||| |||||| | Sbjct 121 CGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTC 180 Query 5334 ATTCAATTCTGTGCAGATTTGCCCCATACATGAGGTACATTGAGTACAAGCTTCAGGCTG 5393 | | | || |||||||| || || ||||| ||||| || ||| | ||| | || | Sbjct 181 ACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGG 240 Query 5394 CATCGCCCAGCAACTTGTACATTCATTCTGGCAAAAACCTTGAAGATCTGAATGAGTGGG 5453 | | ||| || || ||||| ||| ||| || | || || || |||||||||| Sbjct 241 CGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGG 300 Query 5454 TGATCAGGAACAAGTTCTCGGGAATGAGCACGGAATCTGACTATGAGGCTTTCGACTCGA 5513 | | | || ||| || | |||||||||| |||||||| || || || | Sbjct 301 TCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCAT 360 Query 5514 GCCAGGATCACTTTATTTTGAGCTTCGAGATTGAGATTATGAAGCATCTGCAACTGCCTT 5573 |||||||| | || || || || || | | ||| || ||||| | || Sbjct 361 CACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAA 420 Query 5574 GGGACTTAATTGAGGATTATGTCTACATCAAGACTCACCTTGGTTCAAAGTTGGGGAACT 5633 |||| || | | || ||| | | || ||||| ||||| |||||||| ||||||| | Sbjct 421 GGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATT 480 Query 5634 TTGCTATAATGCGTTTCACTGGCGAGGCTAGTACCTTTCTCTTCAATACAATGGCAAACA 5693 |||| || ||| | ||| | || || || ||||| |||||||||||||| | || || | Sbjct 481 TTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATA 540 Query 5694 TGCTTTTCACTTTCTTGAGGTACGACCTAAATGGTTCTGAGGCCATATGTTTTGCTGGCG 5753 |||| |||||||| | | ||| ||| ||| ||| ||| || || ||||| || | Sbjct 541 TGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAG 600 Query 5754 ATGACATGTGCGCAAATCGAAGGCTTCGAGTTTCAAAGAAAAATGAGAATTTCTTGGGCA 5813 |||||||||| || |||| ||| || || |||||| || |||| ||||||| Sbjct 601 ATGACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCAGAACATGAAGGTTTCTTGAATT 660 Query 5814 AGATCAAGCTTAAGGCAAAGGTGCAGTTCACTGAGAAGCCAACTTTCTGCGGCTGGAATC 5873 | ||||| || || || ||| || || || || |||||||| || |||||||| | Sbjct 661 TACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACC 720 Query 5874 TGTGCATGGATGGAATCTTCAAGAGGCCGCAACTAGTGCTTGAAAGGCTGTGTGTAGCAA 5933 || | |||| || || |||| || || || | |||||||| || | |||| Sbjct 721 TGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCTGCATTGCAA 780 Query 5934 GGGAAAAGGACAACCTCGCCAACTGCCTGGACTCTTATGCCATAGAGGTTGGGTATGCCT 5993 || | | | || || | ||| | || ||| ||||| || |||||||||||| Sbjct 781 AAGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACTTGGGTATGCCT 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29965708876376