Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_026616.2 Length=8041 Score E Sequences producing significant alignments: (Bits) Value seq74459 248 4e-62 >seq74459 Length=1629 Score = 248 bits (274), Expect = 4e-62 Identities = 553/821 (67%), Gaps = 17/821 (2%) Strand=Plus/Plus Query 4888 GTTTTCAAAAAGTCAGATTTGTACA--AAATTTGATAACAGATTTAGATGTGCCAAGGCT 4945 ||||||| || ||| | |||| || |||||||| || ||||||| ||| |||||| Sbjct 96 GTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCT 155 Query 4946 GCCCAGTCGATCGTTTGTTTCCAACATTCTGTGTTATGCCGATTTGCGCCCTATATGAGA 5005 || || ||||| || || || || | ||| | ||| |||| || || || || || Sbjct 156 GCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGG 215 Query 5006 TACATTGAAAAATTGCTAGGGGAGGCACTTaaaaaaaCCAATTACTATATCCATTCTGGG 5065 || || || || | || |||||| | | | | | ||| |||||| ||| Sbjct 216 TATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGA---AGTTCTACATCCATAGTGGT 272 Query 5066 AAGAGATTGGAAGATCTGGATGATTGGGTCGTCAAGGGTAATTTTTCAGGAATTTGCACT 5125 ||| | ||||| || || |||| |||||| | |||||||| ||| ||||||| Sbjct 273 AAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACG 332 Query 5126 GAATCTGACTATGAAGCCTTTGATGCTTCCCAGGATCATTGGATCATGGCCTTTGAATTA 5185 ||||| ||||||||||| |||||||| || |||||||| | |||||||| |||||| | Sbjct 333 GAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATC 392 Query 5186 ACACTGATGGAACATTTGGGGCTCCCAAAAGATTTGATTGCGGATTATAGATACATTAAG 5245 | |||||||| || ||||| |||||| |||||| | || |||| | |||||| Sbjct 393 GCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAG 452 Query 5246 ACGCATTTGGGCTCCAAATTGGGAGCCTTTGCAATCATGCGGTTCTCGGGGGAAGCTAGT 5305 || || | || || ||| |||| ||||| || ||| | ||||| |||||||| ||| Sbjct 453 ACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGT 512 Query 5306 ACTTTCCTTTTTAACACCATGGCCAACGCGCTTTTCAC-TTTCTTGAGATACGACACTAG 5364 || || || || || || | || || ||| ||||| |||||| || || ||| || Sbjct 513 ACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAG-TATGACTTAAG 571 Query 5365 GGGTGATGAATTCATATGCTTTGCTGGTGATGATATGTGTGC--CTCAAA-ACATTTGAA 5421 || | || || |||||||| || ||||| |||||||| ||||| || || Sbjct 572 TGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAATCAAAGAC---TGCG 628 Query 5422 GG--TCAGCAACAAATTTGAGGATTTCTTGTCAAAACTTAAGTTGAAGGCTAAGGTTCAA 5479 || |||||| || ||| | ||||||| ||| ||| | || ||||| || Sbjct 629 GGTTTCAGCA--GAACATGAAGGTTTCTTGAATTTACTGAAGCTAAAAGCTAAAGTGGGT 686 Query 5480 TTTACCAAAAACCCGACATTCTGTGGGTGGTCATTATTACCTTTCGGAATTTTCAAGAAG 5539 ||||| |||| || || || ||||| ||| | | | || ||||| ||||| Sbjct 687 TTTACAGAAAAACCAACTTTTTGTGGCTGGAACCTGACGCGGTATGGCATTTTTAAGAAA 746 Query 5540 CCCCAATTGGTCTATGAACGCATCTGCATTGCTAGAGAAAAGAAGAACCTTCACAATTGC 5599 ||||| | | |||| | ||||||||| | ||| | ||| || ||||| Sbjct 747 CCCCAGCTCATACTTGAAAGATGCTGCATTGCAAAAGAGAGGAATGTGCTAGCAGATTGC 806 Query 5600 ATAGATAATTACGCAATTGAATTGTCGTATGCTTATAAAAGAGGGGAGTTAGCAGTCAAT 5659 || ||||||||||| |||||| | |||||| || || || | || || | Sbjct 807 ATCGATAATTACGCCATTGAACTTGGGTATGCCTACAAGTTGAAAGAACTCGCTGTGTGT 866 Query 5660 GCTATGAATGAAGAAGAGACTGATGCTTTTTACAATTGTGT 5700 | ||| |||| ||||| |||| || || | ||| ||||| Sbjct 867 GAGATGGATGAGGAAGAAGCTGAAGCATTCTTCAACTGTGT 907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25592179617560