Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_027527.1 Length=8041 Score E Sequences producing significant alignments: (Bits) Value seq74459 219 2e-53 >seq74459 Length=1629 Score = 219 bits (242), Expect = 2e-53 Identities = 605/917 (66%), Gaps = 19/917 (2%) Strand=Plus/Plus Query 4794 AGACTTTGAAGAAAAGAAACGAAGCAAAAGTGCGGCTACAATAGAGAATCATGCTGGCAG 4853 |||||| ||||| ||||| |||||||| || | ||| || || ||||||||| | Sbjct 2 AGACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCG 61 Query 4854 ATCTTGTAGGGATTGGTTGGCAGATGTTGGTTTGGTGTTTTCCAAAAGTCAAATCTGTAC 4913 || | || ||| ||| || ||||| || ||| ||| | || || Sbjct 62 TTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCAC 121 Query 4914 CAAGTTTGACAACAGGTTCAGGTGTGCAAAAGCTGCACAATCTATCGTATGCTTTCAACA 4973 || ||||| || | || ||| ||| || ||||||||||| || || |||||| || Sbjct 122 GAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCA 181 Query 4974 TTCGGTTTTATGTAGATTTGCCCCTTACATGCGCTATATTGAAAAGCTGCTAGGTGAGGC 5033 | || | || ||||| || |||||||| | ||||| || | | || ||||| Sbjct 182 CGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGC 241 Query 5034 TTTGCTGAAGACAAACTACTACATCCACTCAGGGAAGAGATTAGAAGAGTTGGATGATTG 5093 |||| || || | ||||||||| || ||| | || || ||| | |||| || Sbjct 242 GTTGCCTGAG---AAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTG 298 Query 5094 GGTTATCAGAGGTAATTTCACCGGAGTCTGTACTGAGTCGGACTATGAGGCTTTCGATGC 5153 ||| | | ||||||||| || || || || || || |||||||| || || ||||| Sbjct 299 GGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGC 358 Query 5154 TTCCCAAGATCACTGGATCATGGCCTTTGAATTAACCCTAATGGAACATTTGGGCTTGCC 5213 || || ||||| | |||||||| |||||| | |||| ||||| || |||| | || Sbjct 359 ATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCC 418 Query 5214 TAGGGATTTAATTGCTGATTACAGGTACATCAAGACCCATTTGGGCTCAAAGTTGGGGTC 5273 |||||||| | || || | | || |||||||| | || ||||| ||||| Sbjct 419 AAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAA 478 Query 5274 ATTTGCTATTATGCGGTTTTCGGGCGAGGCAAGCACATTCTTGTTTAACACCATGGCCAA 5333 ||||| |||||| | || || || || ||||| ||||| | || || || | || || Sbjct 479 TTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAA 538 Query 5334 TGCCCTCTTCAC-CTTCTTGCGATATGATACCAGAGGTGATGAATTCATCTGTTTCGCGG 5392 | |||||||| ||||| | ||||| || || | || || || || || | Sbjct 539 TATGCTCTTCACTTTTCTTAAG-TATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAG 597 Query 5393 GGGATGATATGTGTGC--TTCAAA-ACATTTGAAAGTTAGTGACAAATTTGAAGATTTCT 5449 | ||||| |||||||| ||||| || || ||| | || ||||| ||||| Sbjct 598 GAGATGACATGTGTGCGAATCAAAGAC---TGCGGGTTTCAGCAGAACATGAAGGTTTCT 654 Query 5450 TGTCCAAGT---TGAAGTTGAAGGCCAAAGTGCAGTTTACAAAGAACCCCACTTTTTGTG 5506 || || | ||||| | || || |||||| |||||| | || || |||||||||| Sbjct 655 TG---AATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTG 711 Query 5507 GTTGGTCTTTGCTGCCATTCGGTATTTTCAAGAAGCCTCAATTGGTGTATGAGAGAATCT 5566 | ||| || || | || ||||| ||||| || || | | ||| ||| || Sbjct 712 GCTGGAACCTGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCT 771 Query 5567 GTATTGCCAGGGAGAAGAA-GAACTTGCATAATTGCATTGATAATTATGCCATTGAATTG 5625 | ||||| | |||| ||| | || ||| ||||||| |||||||| ||||||||| | Sbjct 772 GCATTGCAAAAGAGAGGAATGTGCTAGCA-GATTGCATCGATAATTACGCCATTGAACTT 830 Query 5626 TCTTACGCTTACAGGCGCGGGGAGTTAGCAGTCAATGCTATGAATGAGGAGGAAACTGAT 5685 || || |||| | || | || || || ||| ||||||| ||| |||| Sbjct 831 GGGTATGCCTACAAGTTGAAAGAACTCGCTGTGTGTGAGATGGATGAGGAAGAAGCTGAA 890 Query 5686 GCCTTTTACAATTGTGT 5702 || || | ||| ||||| Sbjct 891 GCATTCTTCAACTGTGT 907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25592179617560