Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_028111.1 Length=8334 Score E Sequences producing significant alignments: (Bits) Value seq74459 372 2e-99 >seq74459 Length=1629 Score = 372 bits (412), Expect = 2e-99 Identities = 592/846 (70%), Gaps = 8/846 (1%) Strand=Plus/Plus Query 4753 GAGAATTCGAAGAGAAGAAAACGAGTAAGAGTGCAGCAGTTATTGAGAATCACAGTGGCC 4812 |||| |||||||| ||||| || || ||||| || | ||||| || || ||||| Sbjct 1 GAGACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCC 60 Query 4813 GAAGCTGTAGAGACTGGTTAATCGATCTTGGCTTTCTTTTCATTAAAAATCAGCTCTGCA 4872 | | ||||||| |||||||| ||||| ||||||| ||| || | |||| Sbjct 61 GTTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCA 120 Query 4873 CAAAATTCGAGAAACGCTTCGCTGATGCTAAAGCTGCTCAAACGATCCTGTGTTTCCAAC 4932 | ||||| || || || || |||||||| ||||| ||| |||| |||| || | Sbjct 121 CGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTC 180 Query 4933 ATGAGGTACTATGTAGGTTTGCACCCTATGTAAGGTACATTGAGAAAAAATTAAATGATG 4992 | | || || || || || ||||| || | ||||| || ||| |||| ||| || | Sbjct 181 ACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGG 240 Query 4993 CTTTGCCTGCGAAGTATTATATACATAGTGGTAAAAATATTGATGATCTCAATGACTGGG 5052 | ||||||| ||||| || || ||||||||||| | || || || ||||| |||| Sbjct 241 CGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGG 300 Query 5053 TGAAGGACAATGATTTCTCAGGGATTTGCACTGAATCCGATTATGAAGCTTTCGATGCAT 5112 | | ||||| ||| ||||||| ||||| || |||||||| || ||||||| Sbjct 301 TCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCAT 360 Query 5113 CACAGGATCATTATATAATGGCTTTTGAAGTTGCGATAATGAAATACCTCGGYTTACCAA 5172 |||||||||| || || |||||||||||| | || | ||| | || || || | |||| Sbjct 361 CACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAA 420 Query 5173 GGGACTTAATAAATGACTACATTTTTATCAAAACTCACCTTGGYTCGAAACTAGGGAGTT 5232 |||| || | || ||||| |||||||| || || ||||| || || ||||| |||| || Sbjct 421 GGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATT 480 Query 5233 TTGCGATCATGCGTTTCTCCGGTGAGGCAAGTACTTTTCTTTTTAATACGATGAGCAACA 5292 ||||||| ||| | |||||||| || |||||||| ||||| || |||||| | || | Sbjct 481 TTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATA 540 Query 5293 TGCTCTTTACTTTTATGAAGTACGAGATCAATGGATCTGAGTCCATATGCTTTGCTGGAG 5352 ||||||| |||||| | ||||| || | | |||| ||| || |||||||| |||| Sbjct 541 TGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAG 600 Query 5353 ACGATATGTGTGCTTCCAAAAAATTGAGGTTAAGTGATGAACACTCAAGTTACCTTGAA- 5411 | || |||||||| ||| | || || | | ||||| | ||| | |||||| Sbjct 601 ATGACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCAGAACA-TGAAGGTTTCTTGAAT 659 Query 5412 AAACTGAGGTTGAAAGCTAAAGTCTGTTTCACTACCCGACCAACTTTTTGCGGCTGGAGC 5471 ||||| | | ||||||||||| |||| || |||||||||||| ||||||| | Sbjct 660 TTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAAC 719 Query 5472 TTGAATAGACTTGGTATCTTTAAAAAACCGCAACTTGTCTATGAGAGAATGTGTATTGCT 5531 ||| | ||| || ||||| ||||| || || | ||| ||| || ||||| Sbjct 720 CTGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCTGCATTGC- 778 Query 5532 ATAGAAAAGAACAATTTGC---AAAACTGCATAGACAATTATGCCATTGAAGTTTCATAT 5588 | || ||| ||| ||| | | ||||| || ||||| ||||||||| || ||| Sbjct 779 --AAAAGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACTTGGGTAT 836 Query 5589 GCTTAC 5594 || ||| Sbjct 837 GCCTAC 842 Lambda K H 0.635 0.408 0.914 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26528907740976