Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_028868.1 Length=9362 Score E Sequences producing significant alignments: (Bits) Value seq74459 232 4e-57 >seq74459 Length=1629 Score = 232 bits (256), Expect = 4e-57 Identities = 525/787 (67%), Gaps = 2/787 (0%) Strand=Plus/Plus Query 5103 GAGAATTTGAAGAGAAGAAAACTAGCAAAAGTGCTGCTGTTATCGAGAACCATTCTGGAA 5162 |||| || ||||| ||||| ||| ||||||||||| | || || |||||| |||| Sbjct 1 GAGACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCC 60 Query 5163 GGTCATGTCGCGACTGGCTGGCTGATGTTGGATTTATTTTCATGAAAAGTCAGTTTTGCT 5222 | ||| || ||||||| ||| || || ||||||||||| || || ||| Sbjct 61 GTTCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCA 120 Query 5223 CTAAGTGGGACAACAGGTTCAGGGATGCCAAAGCTGGACAAACTTTAGCCTGCTTCCATC 5282 | || | || || | || |||||||| || |||| |||| | ||| ||||| || Sbjct 121 CGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTC 180 Query 5283 ATTCAATCTTGTGTCGCTTTGCGCCCTACATGAGATATATTGAACACAAGCTTCAGGAGG 5342 | | | | || | || || || ||||| || ||||| || || ||| | ||||| Sbjct 181 ACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGG 240 Query 5343 TCCTTCCAGCCAACCTGTACATCCATTCTGGAAAGAACCTGGAAGATCTCAATCGCTGGG 5402 | || | || | ||||||||| ||| ||| |||| || || ||| |||| Sbjct 241 CGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGG 300 Query 5403 TGATTGAGAACAGCTTCACTGGCATGTGCACTGAATCAGACTACGAAGCCTTCGATTCAA 5462 | || | ||| || | ||||| ||||||||||| ||||| || ||| || Sbjct 301 TCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCAT 360 Query 5463 GCCAGGATCATTATATTCTGAGCTTTGAGATTGAAGTCATGAAGCATCTCCAGTTACCTT 5522 |||||||| || || || ||||| || | | ||| || |||| | | || Sbjct 361 CACAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAA 420 Query 5523 GGGACCTAATTGAGGATTATGTGTACATTAAAACCCACCTTGGTTCTAAGCTTGGGAATT 5582 |||| | | | || ||| | | ||||| |||||||| ||||| || || ||||||| Sbjct 421 GGGATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATT 480 Query 5583 TTTCAATCATGAGATTCACTGGTGAGGCAAGCACTTTCTTGTTCAACACGATGGCAAACA 5642 || | || ||||||||| | || || ||||| || || | ||||| ||| | || || | Sbjct 481 TTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATA 540 Query 5643 TGTTGTTCAC-TTTCTTGAGATACGAACTCAATGGTTCAGAGGCCATATGCTTCGCTGGT 5701 || | ||||| |||||| || || || | | ||| |||| || ||||| || || Sbjct 541 TGCTCTTCACTTTTCTTAAG-TATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGA 599 Query 5702 GATGATATGTGCTCGAACCGGAGACTGAGGGTGTCAAATAAACATGAGGGGTTTCTGAGC 5761 ||||| ||||| |||| | |||||| |||| ||| ||||||| || || ||| Sbjct 600 GATGACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCAGAACATGAAGGTTTCTTGAAT 659 Query 5762 AAACTTAGGTTGAAGGCCAAAGTCCAATTTACAGTTAAGCCAACATTTTGTGGATGGAAT 5821 ||| | | | || || ||||| ||||||| || ||||| |||||||| ||||| Sbjct 660 TTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAAC 719 Query 5822 CTGTGCCTTGATGGAATTTTCAAACGCCCCCAACTTGTTTTGGAAAGGCTCTGTGTTGCA 5881 ||| | |||| ||||| || ||||| || | | ||||| ||| ||||| Sbjct 720 CTGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCTGCATTGCA 779 Query 5882 AGAGAGA 5888 | ||||| Sbjct 780 AAAGAGA 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29815448733712