Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_028975.1 Length=9654 Score E Sequences producing significant alignments: (Bits) Value seq74459 257 1e-64 >seq74459 Length=1629 Score = 257 bits (284), Expect = 1e-64 Identities = 562/839 (67%), Gaps = 2/839 (0%) Strand=Plus/Plus Query 5156 GAATTTGAAGaaaaaaaaaCAAGTAAAAGCGCTGCTGTAATTGAAAATCACTCTGGACGC 5215 || || ||||| || || || ||||| ||||| |||||||||| || |||| || Sbjct 3 GACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGT 62 Query 5216 TCATGCAGGGATTGGCTAGCTGATGTCGGATTCATATTTATGAAGAGCCAATTCTGTTCA 5275 ||| || |||| | ||| || || | || ||||| ||||| || | Sbjct 63 TCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACG 122 Query 5276 AAGTGGGACAATCGATTTAGAGATGCTAAAGCGGGGCAGACCCTGGCTTGTTTTCATCAT 5335 || | || ||||||||||| |||||||| || | || | | | || ||| ||| Sbjct 123 AAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCAC 182 Query 5336 TCTGTTTTATGCCGGTTCGCCCCATATATGAGATACATTGAACACAAGCTACAAGCAGCT 5395 | || | ||| | ||||| || || || || || || || || ||| || | || Sbjct 183 GCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGCG 242 Query 5396 TTGCCAGACAACTTGTACATACACTCTGGGAAAAATCTTGAAGACTTAAATGAATGGGTT 5455 ||||| || || || ||||| || ||| || | || || | ||||| ||||| Sbjct 243 TTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTC 302 Query 5456 ATTAGGAGCGGTTTCAAAGGCATGAGCACAGAATCAGACTATGAAGCCTTTGATTCTAGT 5515 || | | |||| |||| | |||| ||||||||||||||||| |||||| | Sbjct 303 CTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCA 362 Query 5516 CAGGACCATTATATTCTAAGCTTTGAGATTGAGGTAATGAAGCATTTGCAGCTTCCTTGG 5575 ||||| || || || | ||||| || | | ||| || || || | | || || Sbjct 363 CAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGG 422 Query 5576 GATCTGATTGAAGACTATGTATACATTAAAACTCACCTCGGGTCTAAATTGGGGAACTTT 5635 ||| || | |||||||| | | ||||| || |||||||| || ||| ||||||| ||| Sbjct 423 GATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTT 482 Query 5636 TCAATAATGCGTTTTACCGGTGAGGCGAGTACTTTCCTGTTCAATACTATGGCCAACATG 5695 | || ||| | || |||| || || ||||| || || |||||||| | || || ||| Sbjct 483 GCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATG 542 Query 5696 CTTTTCACCTTTCTAAGGTATGATCTTAA-TGGTTCTGAGGCCATATGTTTTGCTGGTGA 5754 || ||||| ||||| | |||||| ||||| ||| ||| || || ||||| || || Sbjct 543 CTCTTCACTTTTCTTAAGTATGA-CTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGA 601 Query 5755 TGATATGTGCTCAAATCGTAGGCTTCGCGTTTCCAAGAAACATGAGGGCTTCCTAAGTAA 5814 ||| ||||| | |||| || || || ||||| ||||||| || ||| | | | Sbjct 602 TGACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCAGAACATGAAGGTTTCTTGAATTT 661 Query 5815 ACTCAGATTGAAGGCTAAGGTACAATTTACTGAAAAGCCAACTTTTTGTGGTTGGAACCT 5874 ||| | | || ||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct 662 ACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCT 721 Query 5875 CTGTTTGGATGGCATATTTAAGAGACCACAGCTTGTTCTGGAGAGGCTCTGTGTTGCACG 5934 | ||||||| ||||||| ||| ||||| | || || || ||| ||||| Sbjct 722 GACGCGGTATGGCATTTTTAAGAAACCCCAGCTCATACTTGAAAGATGCTGCATTGCAAA 781 Query 5935 AGAGAAGGACAACCTGGAAAACTGCTTGGACTCCTATGCCATTGAGGTTGGTTATGCCT 5993 ||||| | | || | | | ||| | || || |||||||| |||| ||||||| Sbjct 782 AGAGAGGAATGTGCTAGCAGATTGCATCGATAATTACGCCATTGAACTTGGGTATGCCT 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30748979832816