Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_029085.1 Length=8628 Score E Sequences producing significant alignments: (Bits) Value seq74459 351 5e-93 >seq74459 Length=1629 Score = 351 bits (388), Expect = 5e-93 Identities = 565/806 (70%), Gaps = 12/806 (1%) Strand=Plus/Plus Query 5095 AAGAGTGCTGCCACCATTGAAAACCACGCTGGAAGGTCCTGCAGAGATTGGCTAATAGAT 5154 || |||||||||| ||||||||||| ||||| | || ||| |||| ||| ||| Sbjct 27 AAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGTTCAAATCAAGACTGGCCAATCGAT 86 Query 5155 GTCGGGCTAATATTCATGAAGAGTCAACACTGCACAAAATTTGAAAAAAGATTCTGTGAA 5214 || | | |||||||| ||| ||||| ||||||||||| |||| | || Sbjct 87 CAAGGCTTGGTTTTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGAT 146 Query 5215 GCTAAAGCAGGGCAATCCATCGTTTGCTTCCAGCATGCTGTCTTGTGTCGCTTTGCCCCG 5274 ||||| || | ||||| || || ||||| || || || | || | || || || Sbjct 147 GCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCT 206 Query 5275 TACATGCGTTATATTGAATACAAGTTGAATGAGGTTCTCCCAAAGAAGTACTACGTGCAT 5334 ||||| | ||||| || | ||| | | |||| | || |||||| |||| | ||| Sbjct 207 TACATCAGGTATATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCAT 266 Query 5335 AGTGGGAAAGGGTTAGAAGAGCTAAACTCTTGGGTCATTGGCGGTGACTTCACAGGGATG 5394 ||||| || ||||| || ||||| || |||||| || | ||| | ||| ||| | Sbjct 267 AGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTT 326 Query 5395 TGCACTGAATCGGATTATGAGGCCTTTGATGCCTCTCAAGATCAGTTCATAATGGCTTTT 5454 ||||| ||||| || ||||| || |||||||| || || ||||| | ||| ||||||||| Sbjct 327 TGCACGGAATCAGACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTT 386 Query 5455 GAGATCGAGGTGATGAAGTACTTAGGGTTGCCAAGGGACCTAATCGCTGATTACAAGTTC 5514 || |||| ||||| |||| | ||| | |||||||| | | || || | || Sbjct 387 GAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTT 446 Query 5515 ATTAAGACCCATTTGGGGTCCAAGTTGGGCAATTTTGCAATTATGAGGTTCTCGGGGGAA 5574 ||||||||||| | || || || |||| |||||||| |||||||| ||||| |||||| Sbjct 447 ATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAA 506 Query 5575 GCAAGTACGTTCCTGTTCAACACGATGGCTAATATGCTGTTCACTTTCATGAGGTATGAT 5634 |||||||| || || ||||| ||| | ||||||||||| |||||||| | | |||||| Sbjct 507 GCAAGTACATTTCTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGAC 566 Query 5635 TTAAATGGGAGCGAAAGCATATGCTTCGCAGGTGATGATATGTGCGCC--TCAC-GACGG 5691 |||| ||| | || || || ||||| ||||| ||||| ||||| || ||| ||| | Sbjct 567 TTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAATCAAAGACTG 626 Query 5692 TTAAGATTAAGCACTGAGTACGAGGATTTTTTGGGCAAGTTA---AAGCTCAAAGCCAAG 5748 | || |||| || | || | ||| ||| || ||| ||||| ||||| || Sbjct 627 CGG-GTTTCAGCA--GAACATGAAGGTTTCTTG---AATTTACTGAAGCTAAAAGCTAAA 680 Query 5749 GTGGACTTCACACGTAAACCAACATTCTGTGGTTGGAACCTCACTCCAGATGGTATTTTT 5808 |||| || ||| |||||||| || ||||| |||||||| || | |||| |||||| Sbjct 681 GTGGGTTTTACAGAAAAACCAACTTTTTGTGGCTGGAACCTGACGCGGTATGGCATTTTT 740 Query 5809 AAGAAACCGCAGTTGGTGTACGAGCGAATGTGCGTCGCCAAAGAGACCAATAATCTAGAG 5868 |||||||| ||| | | || || ||| | || ||||||| ||| |||| Sbjct 741 AAGAAACCCCAGCTCATACTTGAAAGATGCTGCATTGCAAAAGAGAGGAATGTGCTAGCA 800 Query 5869 CAGTGCATCGACAATTATGCAATCGA 5894 | |||||||| ||||| || || || Sbjct 801 GATTGCATCGATAATTACGCCATTGA 826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27468832888704