Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_029088.1 Length=8612 Score E Sequences producing significant alignments: (Bits) Value seq74459 288 5e-74 >seq74459 Length=1629 Score = 288 bits (318), Expect = 5e-74 Identities = 516/749 (69%), Gaps = 6/749 (1%) Strand=Plus/Plus Query 5117 TTCATGAAGTCCCAGCACTGCACAAAGTACGAGAAAAGGTTCATCGAGGCAAAAGCGGGG 5176 |||||||| || || ||||| || | || || | || | || || || || | Sbjct 99 TTCATGAAATCACAATTGTGCACGAAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCA 158 Query 5177 CAATCCATTGTATGCTTCCAGCACAGTATTTTGTGTAGATTTGCACCTTATATGAGGTAT 5236 ||||| || || ||||| ||| | | || ||||| |||||||| || |||||| Sbjct 159 CAATCGATAGTGTGCTTTTCTCACGCCGTGCTCTGCAGATTCGCACCTTACATCAGGTAT 218 Query 5237 ATTGAGCTCAAGCTGATGGAAGTACTGCCTAAAAATTTTTACGTTCATAGTGGTAAGGGC 5296 || |||| ||| | ||||| | ||||| | || || ||| | |||||||||||||| Sbjct 219 ATCGAGCAAAAGGTAATGGAGGCGTTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGG 278 Query 5297 CTCGAAGAGCTGAATGACTGGGTCATTGGTGGTGGCTTTAACGGAGTTTGCACTGAGTCG 5356 | || ||||| ||||| |||||| || ||||| || | || |||||||| || || Sbjct 279 TTGGAGGAGCTTAATGAGTGGGTCCTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCA 338 Query 5357 GACTACGAAGCATTTGACGCCTCCCAAGATCAATACATAATGGCCTTCGAATTAAAGCTG 5416 ||||| ||||||||||| || || || ||||||||||| ||||| || ||| | ||| Sbjct 339 GACTATGAAGCATTTGATGCATCACAGGATCAATACATCATGGCTTTTGAAATCGCCCTG 398 Query 5417 ATGGAATATCTGGGCTTACCACGGGACCTCATCGCCGATTACAAGTATATTAAGACCCAC 5476 ||||| |||||||| | ||| |||| | | || || | | ||||||||||||| Sbjct 399 ATGGAGTATCTGGGGATCCCAAGGGATTTGGTGAAAGACTATATTTTTATTAAGACCCAC 458 Query 5477 CTTGGCTCCAAGCTTGGCAACTTCGCGATAATGAGGTTCTCTGGAGAGGCGAGCACCTTC 5536 || || || || || || || || ||||| ||||| ||||| || || || || || || Sbjct 459 CTCGGTTCAAAACTGGGGAATTTTGCGATTATGAGATTCTCCGGGGAAGCAAGTACATTT 518 Query 5537 TTATTTAATACAATGGCAAATATGCTGTTCACGTTCATGAGGTATGACATCAATGGAAGT 5596 | || ||||| | || |||||||| ||||| || | | ||||||| | | ||||| Sbjct 519 CTCTTCAATACGCTCGCTAATATGCTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAA 578 Query 5597 GAGCATATATGCTTTGCGGGGGATGATATGTGCGCC--TCCAAGCGTTTGAGGGTGAGCA 5654 ||| || |||||||| || ||||| ||||| || || ||| | | | | |||| Sbjct 579 GAGAGGATTTGCTTTGCAGGAGATGACATGTGTGCGAATCAAAGACTGCGGGTTTCAGCA 638 Query 5655 ATGAGTATGAGGACTTCCTGTGCAAGCTCAAGTTGAAGGCTAAGGTGGACTTCACTAGAA 5714 || |||| | ||| || || ||| | || ||||| |||| || || || Sbjct 639 --GAACATGAAGGTTTCTTGAATTTACTGAAGCTAAAAGCTAAAGTGGGTTTTACAGAAA 696 Query 5715 CGCCAACCTTCTGTGGCTGGAACTTGACACCCTTTGGAATCTTCAAAAAACCGCAGTTGG 5774 ||||| || |||||||||||| |||| | | ||| || || || ||||| ||| | Sbjct 697 AACCAACTTTTTGTGGCTGGAACCTGACGCGGTATGGCATTTTTAAGAAACCCCAGCTCA 756 Query 5775 TGTACGAAAGGATG-TGTGTTGCTCGTGAAACTAACAATCTGGCGCAGTGCATTGACAAT 5833 | |||| |||| || |||| || | || || || | ||||| || ||| Sbjct 757 TACTTGAAA-GATGCTGCATTGCAAAAGAGAGGAATGTGCTAGCAGATTGCATCGATAAT 815 Query 5834 TACGCCATTGAAGTCTCGTTTGCTTACAA 5862 |||||||||||| | || ||| ||||| Sbjct 816 TACGCCATTGAACTTGGGTATGCCTACAA 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27417680499712