Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_029301.1 Length=7925 Score E Sequences producing significant alignments: (Bits) Value seq74459 118 5e-23 >seq74459 Length=1629 Score = 118 bits (130), Expect = 5e-23 Identities = 395/615 (64%), Gaps = 0/615 (0%) Strand=Plus/Plus Query 4501 GAATTTGAGGATAAAAAGATAAGCAAGAATGCCGCCATGATTGGATCACATCACGGACGT 4560 || || || ||||| |||| || | ||| ||||| |||| | ||| || ||| Sbjct 3 GACTTCGAAGATAAGAAGACTTCAAAAAGTGCTGCCATAATTGAAAACCATGCTGGCCGT 62 Query 4561 TCAACCACAGATTGGCCGATTAATGAGATATTTCTTTTCATAAAGTCACAATTGTGCACA 4620 |||| ||| ||||| || || | || ||||||| || |||||||||||||| Sbjct 63 TCAAATCAAGACTGGCCAATCGATCAAGGCTTGGTTTTCATGAAATCACAATTGTGCACG 122 Query 4621 AAATATGAAAAGAAATTTTGCGATGCCAAAGCAGGTCAGACCTTGGCTTGTTTCTCTCAT 4680 |||| |||||| |||| | ||||| || || | || | | | || || ||||| Sbjct 123 AAATTTGAAAATCGATTTAGGGATGCTAAGGCTGCACAATCGATAGTGTGCTTTTCTCAC 182 Query 4681 ATGATTTTGTGCAAATTTGCGCCTTTAAATAGGTACATCGAGAAAAAGGTGTCTGAAGTC 4740 | | |||| ||| || |||| | ||||| |||||| ||||||| || | Sbjct 183 GCCGTGCTCTGCAGATTCGCACCTTACATCAGGTATATCGAGCAAAAGGTAATGGAGGCG 242 Query 4741 CTGCCTGATCGTTTTTACATCCATCAGAAAAAGAATTTTGATGAGCTTGAGGAGTGGGTT 4800 ||||||| || ||||||||| ||| || || |||||| | |||||||| Sbjct 243 TTGCCTGAGAAGTTCTACATCCATAGTGGTAAGGGGTTGGAGGAGCTTAATGAGTGGGTC 302 Query 4801 AAACGATATGACTTTAGTGGCATATGCACTGAATCAGATTACGAGGCTTATGATTCATCT 4860 || | | || || | ||||| |||||||| || || || | |||| |||| Sbjct 303 CTTCGTGGTAATTTCCAAGGTGTTTGCACGGAATCAGACTATGAAGCATTTGATGCATCA 362 Query 4861 CAGGATGCTTACACTCTCGCATTTGAGTATGAGCTACTGAAGTATCTTGGAGTTTCGAAT 4920 |||||| |||| | || ||||| | || || ||||||| || | | | Sbjct 363 CAGGATCAATACATCATGGCTTTTGAAATCGCCCTGATGGAGTATCTGGGGATCCCAAGG 422 Query 4921 TCTATGCTAAGTGATTACCTTTATTTGAAGATGCATCTGAATTGCAAATTGGGTAATTTA 4980 | || | | || || ||| | | |||| || || || ||| |||| ||||| Sbjct 423 GATTTGGTGAAAGACTATATTTTTATTAAGACCCACCTCGGTTCAAAACTGGGGAATTTT 482 Query 4981 GCTATAATGAGGTTCACGGGCGAATTCTGTACTTTCCTCTTCAACACACTAACGAACATG 5040 || || ||||| ||| | || ||| |||| || |||||||| || || | || ||| Sbjct 483 GCGATTATGAGATTCTCCGGGGAAGCAAGTACATTTCTCTTCAATACGCTCGCTAATATG 542 Query 5041 CTTTTTACATTCATGAAATATGATGTTCGGAGGGCTCATGCCATTTGTTTTGCCGGTGAT 5100 || || || || | || ||||| | | | | ||||| ||||| || ||| Sbjct 543 CTCTTCACTTTTCTTAAGTATGACTTAAGTGGAAAAGAGAGGATTTGCTTTGCAGGAGAT 602 Query 5101 GATATGTGTGCTAAT 5115 || |||||||| ||| Sbjct 603 GACATGTGTGCGAAT 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25221324797368