Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_000855.1 Length=11158 Score E Sequences producing significant alignments: (Bits) Value seq306 87.8 1e-13 >seq306 Length=313411 Score = 87.8 bits (96), Expect = 1e-13 Identities = 222/333 (67%), Gaps = 16/333 (5%) Strand=Plus/Minus Query 6517 ATCGCACTGAAAGTCAAGGAGATGGAACTCAAAATCAAAGGTAGAGGATTTGGCTTGATG 6576 |||| | | ||||| || || |||||||| ||| | |||| |||| |||||| | ||| Sbjct 42503 ATCGGAATAAAAGTAAAAGAAATGGAACTGAAATTGGAAGGCAGAGAATTTGGACTAATG 42444 Query 6577 GCCTTTAGGCCAAGACTTCTTCAGGTTCTCCGAGAGAGCATCGCCAAAAAGACCAGTAAA 6636 | ||| ||| ||||| || || || ||||| || |||||||||| || || || Sbjct 42443 ACTTTTCAGCCTAGACTGCTGCAAGTGCTCCGGGAATGCATCGCCAAGAAAACGGCAAAG 42384 Query 6637 TTATTCCCAGAAATAACCATGACCTTCTCAGACCTCGAGTTGAAGAAGAAAAAATTTCA- 6695 | ||||| || || || ||||| |||||| || || ||||||||||| | | Sbjct 42383 ATGTTCCCCGAGATCACAATGACAGATTCAGACTTCA--TTAAAGAAGAAAAAGTACAAG 42326 Query 6696 ---ACTTTCAAG--GAAGAGTGATGACAGGAGAGGATACATCCATATCAGCAAAAGTCTC 6750 | || | || |||| ||| || ||| ||||| ||||| || | | | Sbjct 42325 ATTAGTTCCCAGTCGAAGGGTG----CAACTGAG--TACATTACTATCAAGAAGACTTTA 42272 Query 6751 GATATAAACAAGTTTTGCACCAGTCAACGCCAGTTCAACTCCCTGGCGGTTTTCCAGAGT 6810 || || | ||||| || | || || | ||||| | || ||||| || | | || | Sbjct 42271 GACATTGAGAAGTTCTGTTCTAGACAGAGACAGTTTCAATCTCTGGCTGTGTACAAG--T 42214 Query 6811 CTAGATGAACTTCTGGGGACAGATCAGCTCTTC 6843 ||||||||||| | || |||| | |||||| Sbjct 42213 CTAGATGAACTCTTAGGCACAGGAAACCTCTTC 42181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35566541841896