Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_001542.1 Length=11932 Score E Sequences producing significant alignments: (Bits) Value seq1383 87.8 1e-13 >seq1383 Length=104272 Score = 87.8 bits (96), Expect = 1e-13 Identities = 398/613 (65%), Gaps = 26/613 (4%) Strand=Plus/Plus Query 7017 GAAGACTTGATAATTGGCCTCA-AGCCAAAGGAACGGGAATTGAAGATTGAAGGTCGATT 7075 ||||| || |||| || | | |||||| |||| | ||| | || || || |||| Sbjct 8300 GAAGAGCTGGTAATCGGATTAAGAGCCAA-GGAAAGAGAAGTAAAAATCTCGGGAAGATT 8358 Query 7076 CTTTGCTCTAATGTCATGGAATCTAAGATTGTATTTTGTCATCACTGAAAAACTCTTGGC 7135 ||| || | ||||| ||| | || ||| || ||||||||||| || | || | | Sbjct 8359 CTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGAT--C 8416 Query 7136 CAACTACATCTTG--CCACTTTTTGACGCGCTGACTATGACAGACAACCTGAACAAGGTG 7193 || | || || |||||||| | | | || ||| | |||||| ||| || ||| Sbjct 8417 AAAGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTG 8476 Query 7194 TTTAAAAAGCTGATCGACAGGGTCACCGGGCAAGGGCTT--CTGGACTATTCAAGGGTCA 7251 | || ||| |||| || | | || | ||| |||| || || ||||| || || Sbjct 8477 ATCAAGAAGATGATAGATA-GCTCCCTGGGACAGGGATTAACT-GACTACTCCCAAATCG 8534 Query 7252 CATATGCATTTCACCTGGACTATGAAAAGTGGAACAACCATCAAAGATTAGAGTCAACAG 7311 || ||| ||| | || |||||||| |||||||| || ||||||| || ||||||| Sbjct 8535 CAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAG 8594 Query 7312 AGGATGTATTTTCTGTCCTAGATCAAGTGTTTGGATTGAAGAG-AGTGTTTTCTAGAACA 7370 |||||| |||| | | || | |||||||| | || | | |||||| | ||| Sbjct 8595 CCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATT-ACCAGCACTTTTTTCTCGTACA 8653 Query 7371 CACGAGTTTTTTCAG--AAGTCCTGGATCTATTATTCAGACAGATCAGACCTCAT--CGG 7426 || |||||||| || |||| | | ||||| || ||| | ||| | || Sbjct 8654 CATCAGTTTTTTAAGGAAAGT--TTAGTTTATTACAATGAAAGACCCGACTTAATGATCA 8711 Query 7427 GTTACGGGAGGATCAAATATACTGCTTAGATGCGTCCAACGGCCCAACCTGTTGGAATGG 7486 || | |||| | | | |||||| || | | | || |||||||||||| Sbjct 8712 GTGA-TGGAGAAAC-ATTATACTCGAAGGAAGGAT--ATTGG----GTCTGTTGGAATGG 8763 Query 7487 CCAGGATGGCGGGCTAGAAGGCTTACGGCAGAAGGGCTGGAGTCTAGTCAGCTTATTGAT 7546 ||| || ||||| ||||| | | ||| | || |||||| || | | | | | | Sbjct 8764 ACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGT 8823 Query 7547 GATAGATAGAGAATCTCAAATCAGGAACACAAGAACCAAAGTACTAGCTCAAGGAGACAA 7606 |||| ||||||| | |||| | || || || || | | |||||||||||||| Sbjct 8824 ACTAGAGAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAA 8883 Query 7607 CCAGGTTTTATGT 7619 ||||||| ||||| Sbjct 8884 CCAGGTTATATGT 8896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38041681509728