Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_002526.1
Length=14900
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 192 6e-45
seq283 93.3 4e-15
>seq1383
Length=104272
Score = 192 bits (212), Expect = 6e-45
Identities = 422/628 (67%), Gaps = 6/628 (1%)
Strand=Plus/Plus
Query 9982 ATTTCTCAAGGCGGTGAATGATTATGGTTTAGATTGGGAAAAATTGGTAATTGGACTAAA 10041
|||||||||| | | | ||| | || || | | | ||| | ||||||| ||| |||
Sbjct 8263 ATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAG 8322
Query 10042 GGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtttttttCATTAATGTCTTATGAATT 10101
|| ||||||||||| | ||| || || || || || || ||||| | ||| |
Sbjct 8323 AGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACT 8382
Query 10102 AAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGA 10161
|| || || |||||| || |||||| | || ||| |||| | ||| ||| | || |
Sbjct 8383 CAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTTTTCAA 8442
Query 10162 AGGATTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAG 10221
||| || |||||||| || || | | || || ||||| || ||| ||||| |||
Sbjct 8443 AGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAGCTCCCT 8502
Query 10222 TGGTCAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAA 10281
|| |||||| || || || | ||| |||||||||| | || |||||||||||
Sbjct 8503 GGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTATGAAAA 8562
Query 10282 ATGGAATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATT 10341
|||||| || | |||||| ||| || | | || || |||||||||||||| |||
Sbjct 8563 ATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATT 8622
Query 10342 TTTAGGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTA 10401
||| || || || | ||| || | || ||| ||||||| | | ||||| | ||
Sbjct 8623 TTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAAAGTTTAGTTTA 8682
Query 10402 TTACAACCAAAGACCAGACCTCATGAT-GGTGA--GAGGACGGGAATGTCTGAACAGATT 10458
|||||| ||||||| ||| | ||||| |||| ||| | || || | ||
Sbjct 8683 TTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACATTAT-ACTCGAAGGAAG 8741
Query 10459 GGGAGTGAAAGTGTGTTGGGAAGGACAAAAGGGAGGATTAGAAGGTTTGAGACAAAAGGG 10518
| | || || |||||| | ||||| ||||| | ||||| | ||||| | ||
Sbjct 8742 GATATTG--GGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGG 8799
Query 10519 ATGGAGCATATTAAATTATTTGATGATAGAGAGAGAAAGTAGAGTAAGAAACACAAGAGT 10578
||||| |||||||| | | ||||||||||| ||| | || | || || ||||
Sbjct 8800 GTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCCGAGT 8859
Query 10579 TAAAATTCTTGCTCAAGGAGACAATCAG 10606
|| | | |||||||||||||| |||
Sbjct 8860 GAACACATTGGCTCAAGGAGACAACCAG 8887
Score = 105 bits (116), Expect = 6e-19
Identities = 195/284 (69%), Gaps = 4/284 (1%)
Strand=Plus/Plus
Query 10018 GGAAAAATTGGTAATTGGACTAAAGGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtt 10077
|||| || | ||||| ||||||| || ||||||| || | ||| | || | ||
Sbjct 21096 GGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATT 21155
Query 10078 tttttCATTAATGTCTTATGAATTAAGGGATTATTTTGTCTCAACGGAGTACTTAATaaa 10137
||| || | ||||||| ||| || | | || ||||| ||||| || |||| ||
Sbjct 21156 TTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAA 21215
Query 10138 aaaaTACTTTGTGCCATTATTTGAAGGATTGACAATGGCTGATGACCTAAATACTGTTAT 10197
| |||||| ||| || | ||| |||| || || ||||| || | | | ||| |||||
Sbjct 21216 AGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTAT 21275
Query 10198 CaaaaaaaTGTTAGATG--TCTCTAGTGGTCAGGGAACAAGGGAATATGAATACATCACA 10255
|| |||||| |||| ||||||| || ||| | || || | ||||||
Sbjct 21276 AAAGAAAATGATAGACAGTTCTCTAGAA--CAAGGACTCACTGACTACTCCCAGATCACA 21333
Query 10256 ATTGCCAATAATATTGATTATGAAAAATGGAATAACTATCAAAG 10299
|| || ||| | ||||| ||||| |||||||||||| |||||||
Sbjct 21334 ATCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377
Score = 89.7 bits (98), Expect = 5e-14
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 10249 CATCACAATTGCCAATAATATTGATTATGAAAAATGGAATAACTATCAAAGAATTGAATC 10308
||||||||| ||||| | || |||||||| |||||||||||| |||||||| || ||
Sbjct 7420 CATCACAATCGCCAACCACATAGATTATGAGAAATGGAATAACCATCAAAGATACGAGTC 7361
Query 10309 CAATGGGCCGGTGTTCACTGTGATGGG 10335
|| || ||| || ||||||||||||||
Sbjct 7360 CACTGAGCCAGTATTCACTGTGATGGG 7334
>seq283
Length=322283
Score = 93.3 bits (102), Expect = 4e-15
Identities = 109/145 (75%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 10255 AATTGCCAATAATATTGATTATGAAAAATGGAATAACTATCAAAGAATTGAATCCAATGG 10314
|||||| || | || ||||| ||||| |||||||| ||||||||||| || | |||
Sbjct 272171 AATTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAA 272230
Query 10315 GCCGGTGTTCACTGTGATGGGACGATTTTTAGGCTTGCCTAATTTGTT-TACTAGAACTC 10373
|| ||||||| ||| ||||| ||| || || ||| ||||| |||| ||| || || |
Sbjct 272231 ACCAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAG-ACCC 272289
Query 10374 ATGAGTTTTTCCAAAAGAGTTTGAT 10398
|||| || |||||| | || || ||
Sbjct 272290 ATGAATTCTTCCAACAAAGCTTTAT 272314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47528831261503
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |