Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq1383 192 6e-45 seq283 93.3 4e-15 >seq1383 Length=104272 Score = 192 bits (212), Expect = 6e-45 Identities = 422/628 (67%), Gaps = 6/628 (1%) Strand=Plus/Plus Query 9982 ATTTCTCAAGGCGGTGAATGATTATGGTTTAGATTGGGAAAAATTGGTAATTGGACTAAA 10041 |||||||||| | | | ||| | || || | | | ||| | ||||||| ||| ||| Sbjct 8263 ATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAG 8322 Query 10042 GGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtttttttCATTAATGTCTTATGAATT 10101 || ||||||||||| | ||| || || || || || || ||||| | ||| | Sbjct 8323 AGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACT 8382 Query 10102 AAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGA 10161 || || || |||||| || |||||| | || ||| |||| | ||| ||| | || | Sbjct 8383 CAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTTTTCAA 8442 Query 10162 AGGATTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAG 10221 ||| || |||||||| || || | | || || ||||| || ||| ||||| ||| Sbjct 8443 AGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAGCTCCCT 8502 Query 10222 TGGTCAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAA 10281 || |||||| || || || | ||| |||||||||| | || ||||||||||| Sbjct 8503 GGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTATGAAAA 8562 Query 10282 ATGGAATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATT 10341 |||||| || | |||||| ||| || | | || || |||||||||||||| ||| Sbjct 8563 ATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATT 8622 Query 10342 TTTAGGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTA 10401 ||| || || || | ||| || | || ||| ||||||| | | ||||| | || Sbjct 8623 TTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAAAGTTTAGTTTA 8682 Query 10402 TTACAACCAAAGACCAGACCTCATGAT-GGTGA--GAGGACGGGAATGTCTGAACAGATT 10458 |||||| ||||||| ||| | ||||| |||| ||| | || || | || Sbjct 8683 TTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACATTAT-ACTCGAAGGAAG 8741 Query 10459 GGGAGTGAAAGTGTGTTGGGAAGGACAAAAGGGAGGATTAGAAGGTTTGAGACAAAAGGG 10518 | | || || |||||| | ||||| ||||| | ||||| | ||||| | || Sbjct 8742 GATATTG--GGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGG 8799 Query 10519 ATGGAGCATATTAAATTATTTGATGATAGAGAGAGAAAGTAGAGTAAGAAACACAAGAGT 10578 ||||| |||||||| | | ||||||||||| ||| | || | || || |||| Sbjct 8800 GTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCCGAGT 8859 Query 10579 TAAAATTCTTGCTCAAGGAGACAATCAG 10606 || | | |||||||||||||| ||| Sbjct 8860 GAACACATTGGCTCAAGGAGACAACCAG 8887 Score = 105 bits (116), Expect = 6e-19 Identities = 195/284 (69%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 10018 GGAAAAATTGGTAATTGGACTAAAGGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtt 10077 |||| || | ||||| ||||||| || ||||||| || | ||| | || | || Sbjct 21096 GGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATT 21155 Query 10078 tttttCATTAATGTCTTATGAATTAAGGGATTATTTTGTCTCAACGGAGTACTTAATaaa 10137 ||| || | ||||||| ||| || | | || ||||| ||||| || |||| || Sbjct 21156 TTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAA 21215 Query 10138 aaaaTACTTTGTGCCATTATTTGAAGGATTGACAATGGCTGATGACCTAAATACTGTTAT 10197 | |||||| ||| || | ||| |||| || || ||||| || | | | ||| ||||| Sbjct 21216 AGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTAT 21275 Query 10198 CaaaaaaaTGTTAGATG--TCTCTAGTGGTCAGGGAACAAGGGAATATGAATACATCACA 10255 || |||||| |||| ||||||| || ||| | || || | |||||| Sbjct 21276 AAAGAAAATGATAGACAGTTCTCTAGAA--CAAGGACTCACTGACTACTCCCAGATCACA 21333 Query 10256 ATTGCCAATAATATTGATTATGAAAAATGGAATAACTATCAAAG 10299 || || ||| | ||||| ||||| |||||||||||| ||||||| Sbjct 21334 ATCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 89.7 bits (98), Expect = 5e-14 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 10249 CATCACAATTGCCAATAATATTGATTATGAAAAATGGAATAACTATCAAAGAATTGAATC 10308 ||||||||| ||||| | || |||||||| |||||||||||| |||||||| || || Sbjct 7420 CATCACAATCGCCAACCACATAGATTATGAGAAATGGAATAACCATCAAAGATACGAGTC 7361 Query 10309 CAATGGGCCGGTGTTCACTGTGATGGG 10335 || || ||| || |||||||||||||| Sbjct 7360 CACTGAGCCAGTATTCACTGTGATGGG 7334 >seq283 Length=322283 Score = 93.3 bits (102), Expect = 4e-15 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 10255 AATTGCCAATAATATTGATTATGAAAAATGGAATAACTATCAAAGAATTGAATCCAATGG 10314 |||||| || | || ||||| ||||| |||||||| ||||||||||| || | ||| Sbjct 272171 AATTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAA 272230 Query 10315 GCCGGTGTTCACTGTGATGGGACGATTTTTAGGCTTGCCTAATTTGTT-TACTAGAACTC 10373 || ||||||| ||| ||||| ||| || || ||| ||||| |||| ||| || || | Sbjct 272231 ACCAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAG-ACCC 272289 Query 10374 ATGAGTTTTTCCAAAAGAGTTTGAT 10398 |||| || |||||| | || || || Sbjct 272290 ATGAATTCTTCCAACAAAGCTTTAT 272314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47528831261503