Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_002803.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq1383 224 7e-55 seq283 129 4e-26 >seq1383 Length=104272 Score = 224 bits (248), Expect = 7e-55 Identities = 589/886 (66%), Gaps = 26/886 (3%) Strand=Plus/Plus Query 6194 TGAAGAGGGATTACCCAGAGATAATCTCATCATTGGATTGAAAGGGAAAGAAAGAGAGCT 6253 ||| || ||||| ||||| | || | || ||||| | || || |||||||| | Sbjct 8281 TGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGT 8340 Query 6254 TAAGATTGCGGGGAGATTCTTCTCTCTGATGTCATGGCAATTGAGGGAGTACTTTGTAAT 6313 || || |||| |||||||||||| ||||||| ||| || | || || |||||||| || Sbjct 8341 AAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCAT 8400 Query 6314 TACAGAGTATCTGATCAAGACACATTATGTTCCGCTCTTCAAGGGATTAACGATGGCCGA 6373 |||||||| |||||||| | ||||||| || || ||||| || ||||| ||||| || Sbjct 8401 CACAGAGTACCTGATCAAAGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGA 8460 Query 6374 CGATCTAACCTCTGTGGTAAAGAAGATGTTAGATAACACTAATGGGCAAGGCTTGGACGA 6433 | | | ||| | ||| | ||||||||| |||||| | | || || || || || Sbjct 8461 CAACATGACCACCGTGATCAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGA 8520 Query 6434 CTACTCATCTATAT-GC-ATTGCGAACCACATTGATTATGAAAAATGGAACAATCATCAA 6491 |||||| | | || || ||||| |||||||| ||||||||||||||||||||||| ||| Sbjct 8521 CTACTC--CCAAATCGCAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAA 8578 Query 6492 CGGAAAGAATCCAATGGGCCTGTATTTCGAGTCATGGGTCAATTCTTAGGATACCCTCGA 6551 | | || || | | |||||||| || ||||| |||| || |||| || | Sbjct 8579 AGATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCA 8638 Query 6552 CTGTTTGAAAGGACACATGAATTCTTTGAGTCAAGTCTCATTTATTATAACGGGAGGCCG 6611 || ||| | |||||| | || ||| || |||| | ||||||| || | || || Sbjct 8639 CTTTTTTCTCGTACACATCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCC 8698 Query 6612 GACCTGATGGATGTGAGA-GGGGATTCTTTAGTGAATACAACAGATAAGATA----GTCT 6666 ||| | || ||| | || || || | ||| | | | || | |||| |||| Sbjct 8699 GACTTAAT-GATCAGTGATGGAGAAACATTA--TACTCGA--AGGAAGGATATTGGGTCT 8753 Query 6667 GCTGGGAAGGGCAAGCAGGCGGATTAGAAGGGCTTTCGCAGAAAGGATGGAGTGTACTCA 6726 | ||| | || || ||| || | ||||| || ||| | || |||||| || | | Sbjct 8754 GTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAA 8813 Query 6727 ATTTACTGGTCATCAATCGAGAATCATCTATCAGAAACACAGTTGTAAAGGTGCTGGCTC 6786 | | || || | | |||||| || | || || || || |||||| Sbjct 8814 ACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTC 8873 Query 6787 AGGGGGACAATCAGGTGATCTGCACGCAGTATAAAA--CCAAAAATTACAA-AAATGAGG 6843 | || ||||| ||||| || || || || ||||||| |||| ||| || | ||| | Sbjct 8874 AAGGAGACAACCAGGTTATATGTACTCACTATAAAATCCCAACCGTTAGAACACCTGAAG 8933 Query 6844 ATGAGTTAAAAATGCTCCT--GACAGCGA-TGGTAGAGAACAATCAGACGATCATGAATG 6900 | ||||| || ||| ||| || | | |||||| | | |||||||||| Sbjct 8934 A------AAAAAAGCCCCTCATACAAGGAGCGATTCAGAACACAAATGCCATCATGAATG 8987 Query 6901 GGATCATAACAGGGACAGGAAAATTGGGATTAATCATTAACAATGATGAGACCATGCAAT 6960 | | || ||| || || ||||||||||| || || ||| ||||| |||| Sbjct 8988 CAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCATCAATAAACGTGAAACCATACAAT 9047 Query 6961 CGGCGGATTACTTAAATTACGGTAAAGTGCCTGTTTTTCGAGGAATATTAAGGGGGTTGG 7020 | || ||||| | ||||| || ||||| || | || | ||||| | | |||| Sbjct 9048 CAGCAGATTATATGAATTATGGCAAAGTACCGATCTTCCAAGGAAATATCTTGCCGTTGA 9107 Query 7021 AAACCAAACGATGGTCTAGAGTCACCTGCATCACCAATGATCAGAT 7066 || ||||| ||| ||| | ||||| | |||||||||||||| Sbjct 9108 TTACTAAACGTGTGTCAAGAATGACCTGTGTGACCAATGATCAGAT 9153 Score = 107 bits (118), Expect = 1e-19 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 6268 GATTCTTCTCTCTGATGTCATGGCAATTGAGGGAGTACTTTGTAATTACAGAGTATCTGA 6327 |||| ||||| || | ||| ||| || | | ||||||||||| || || || ||||| | Sbjct 37935 GATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATATCTAA 37994 Query 6328 TCAAGACACATTATGTTCCGCTCTTCAAGGGATTAACGATGGCCGACGATCTAACCTCTG 6387 |||| | | ||||| ||||| || || || ||||| ||||||||| || | ||| ||| Sbjct 37995 TCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGACCACTG 38054 Query 6388 TGGTAAAGAAGATGTTAGATAACACTAATGGGCAAGGCTTGGACGACTACTCATCTATAT 6447 | | ||||| ||| | || | || || ||| || | ||||| ||| || Sbjct 38055 TCATCAAGAAAATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCACAAATCA 38114 Query 6448 GCATTGCGAACCACATTGATTATGAAAAATGGAACAATCATCAA 6491 || || ||||| || || ||||| || |||||||| |||||| Sbjct 38115 CAATCGCAAACCATATCGACTATGAGAAGTGGAACAACCATCAA 38158 >seq283 Length=322283 Score = 129 bits (142), Expect = 4e-26 Identities = 256/373 (69%), Gaps = 7/373 (2%) Strand=Plus/Plus Query 6207 CCCAGAGATA-ATCTCATCATTGGATTGAAAGGGAAAGAAAGAGAGCTTAAGATTGCGGG 6265 |||||| | | | || || || |||||||||||||||||||||| | | || | | Sbjct 271932 CCCAGATAAAGAACTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCA-GAAAGACAG 271990 Query 6266 GAGATT-CTTCTCTCTGATGTCATGGCAATTGAGGGAGTACTTTGTAATTACAGAGTATC 6324 |||| ||||||| || || ||| |||||||| || || |||||||| ||||||| Sbjct 271991 ACGATTTCTTCTCTTTG---TCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATC 272047 Query 6325 TGATCAAGACACATTATGTTCCGCTCTTCAAGGGATTAACGATGGCCGACGATCTAACCT 6384 | || |||| | |||||||| |||||| | | || | ||| || || | || | Sbjct 272048 TCATTAAGATGGAGTATGTTCCTCTCTTCCATGTTTTGCC-ATGAAAGATGACATGACAT 272106 Query 6385 CTGTGGTAAAGAAGATGTTAGATAACACTAATGGGCAAGGCTTGGACGACTACTCATCTA 6444 | || |||||||| ||| | || | || | || ||||| | || ||||| | Sbjct 272107 CAGTTGTAAAGAAAATGATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATG 272166 Query 6445 TATGCATTGCGAACCACATTGATTATGAAAAATGGAACAATCATCAACGGAAAGAATCCA 6504 | | ||||| |||||||| ||||| ||||| ||||| || |||||| | | || | | Sbjct 272167 TTGGAATTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTA 272226 Query 6505 ATGGGCCTGTATTTCGAGTCATGGGTCAATTCTTAGGATACCCTCGACTGTTTGAAAGGA 6564 || || || || || |||||| ||||||| |||| || ||||| | || Sbjct 272227 ATAAACCAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGA 272286 Query 6565 CACATGAATTCTT 6577 | ||||||||||| Sbjct 272287 CCCATGAATTCTT 272299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35122040015244