Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_007020.1 Length=11440 Score E Sequences producing significant alignments: (Bits) Value seq1383 145 6e-31 >seq1383 Length=104272 Score = 145 bits (160), Expect = 6e-31 Identities = 395/594 (66%), Gaps = 8/594 (1%) Strand=Plus/Plus Query 6593 TAAGACCAAAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATGAGTTGGG 6652 ||||| | || || |||||| | || | | || || || || | ||||| |||| Sbjct 8319 TAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGG 8378 Query 6653 AGCTCAGAGAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATTCCTCTTT 6712 | |||||||| ||||| || | || ||||| ||||| || ||| ||| | || |||| Sbjct 8379 AACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTTT 8438 Query 6713 TTAAGGGGTTGACGATGGCCGATGATATGACCGGAGTCATCAAGAAACTGCTAGAGTGCT 6772 | || || || || ||||| || | |||||| || |||||||| || |||| ||| Sbjct 8439 TCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAGCT 8498 Query 6773 CCAACGGCCACGGAGAAACAGATTACTCAAATATAACCATATCAAATCACTTAGATTACT 6832 || || || ||| ||| || ||||| | || | || | || ||| | ||||| Sbjct 8499 CCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTATG 8558 Query 6833 CGAAATGGAACAATCATCAAAGATATGAATCCAACA-AATATGTATTCCAAGTGATGGGA 6891 |||||||||||||| ||||||||||| | ||||| ||||||| |||||||| Sbjct 8559 AAAAATGGAACAATCACCAAAGATATGACT-CAACAGCCCCTGTATTCACTGTGATGGGG 8617 Query 6892 TCCTTTTTAGGATATCCAAATCTTATCTCTCGCACCCACGAATTTTTCCAAAAATCCTTG 6951 ||||| |||| ||| ||| | ||||| || || | ||||| | || || Sbjct 8618 AAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAAAGTTTA 8677 Query 6952 ATATATTTCATAAATAGGCCAGATTTAATGGTC-GTAAAAGGGAACACATTGGAGCCTAA 7010 | |||| || | || || || |||||| || || | | ||| ||||| | | || Sbjct 8678 GTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAA-ACATTATACTCGAA 8736 Query 7011 GGGTCAGAT-GAGGGTATGCTGGAACGGGCAAGCCGGGGGCCTCGAAGGTCTTCGTCAAA 7069 || ||| |||| || ||||| || || || || |||||||| || | || Sbjct 8737 -GGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGT 8795 Query 7070 AAGGGTGGAGTATTGTAAATCTCTTGCTCATCATGAGGGTTGGAAAGCTCAGGAACA-CC 7128 | ||||||||||| |||| ||| | | | ||| | | || | | || | || Sbjct 8796 ACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCC 8855 Query 7129 GAGATCAAAATACTGGCTCAGGGTGACAATCAGGTTATGAATTCCCACTACAAA 7182 ||| | || | | ||||||| || ||||| |||||||| | | ||||| ||| Sbjct 8856 GAG-TGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTATAAA 8908 Score = 87.8 bits (96), Expect = 1e-13 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6607 AGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATGAGTTGGGAGCTCAGAGAGTAC 6666 |||||| | || | | |||| | ||||| | || | | |||||| || | |||||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6667 TTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATTCCTCTTTTTAAGGGGTTGACG 6726 || || | || || ||||| || || ||| | | | || || ||||| ||||| || Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6727 ATGGCCGATGATATGACCGGAGTCATCAAGAAACTGCTAGAGTGCTCCAACGGCCACGGA 6786 |||||||| |||||||| |||||||||||| || | || | || || || | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 6787 GAAACAGATTACTCAAATATAACCATATCAAATCACTTAGATTACTCGAAATGGAACAAT 6846 || || || ||| | || || || |||| || | || || ||| |||||||| Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 6847 CATCAAAG 6854 |||||||| Sbjct 38153 CATCAAAG 38160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36468336914672