Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_008514.1 Length=11545 Score E Sequences producing significant alignments: (Bits) Value seq1383 217 1e-52 seq283 136 3e-28 >seq1383 Length=104272 Score = 217 bits (240), Expect = 1e-52 Identities = 614/921 (67%), Gaps = 48/921 (5%) Strand=Plus/Plus Query 6694 AGAAGATCTGGTTATCGGATTGAAAGGGAAAGAAAGAGAATTAAAGAAAGCAGGACGTTT 6753 |||||| ||||| |||||||| | || || ||||||||| |||| | | ||| | || Sbjct 8299 AGAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATT 8358 Query 6754 CTTCTCCCTTATGTCATGGAAATTACGAGAGTATTTCGTCATGACAGAATATCTGATCAA 6813 |||||| | ||||| ||| || | |||| || || ||||| ||||| || |||||||| Sbjct 8359 CTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAA 8418 Query 6814 ACACCACTTTGTCCCACTATTTCATGGATTGACTATGGCGGATGACATGACTCAAGTTAT 6873 | | | | ||| ||||| || | || || || |||||||| ||||||| || || Sbjct 8419 AGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGAT 8478 Query 6874 GAAGAAAATGTTAGACAGAAGTCAAGGGCAAGGAGAGAATGACTACCAGAGAGTCAGTAT 6933 ||||| ||| |||| || | || || ||| | ||||||| | || || Sbjct 8479 CAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAAT 8538 Query 6934 TGCAAACCATATTGACTATGAAAAGTGGAACAATCACCAAAGGAGAGAATCAAATGGACC 6993 ||| ||||| || || |||||||| ||||||||||||||||| || |||| | || Sbjct 8539 TGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAG--CC 8596 Query 6994 AACGT-TTCGC-GTGATGGGACAATTCTTGGGCTATCCA----TCTTTGATCGAAAAGAC 7047 || ||| | |||||||| |||| || || | ||| | ||| ||| || Sbjct 8597 CCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCG----TAC 8652 Query 7048 GCATGAGTTCTTCGAGAAAAGCCCGATATACTACAATGGCAGGCCGGATTTAATG-CAAG 7106 ||| |||| || || |||| | || ||||||| || || || |||||| || Sbjct 8653 ACATCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAG 8712 Query 7107 TAACTGGA-AACCAGGTGATCAACTCCACTGA--TAAACT-TGTTTGCTGGCAGGGACAA 7162 | | |||| || || | || |||| | || | | | || || ||| | ||||| Sbjct 8713 TGA-TGGAGAAACA--TTAT--ACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAG 8767 Query 7163 AAGGGAGGGCTAGAGGGACTAAGACAGAAAGGATGGAGCATTTTGAATCTGTTAATCATC 7222 |||||||| || ||||| |||||| | || ||||| || || || || || | | Sbjct 8768 CTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTA 8827 Query 7223 AGGAGAGAGTCTAAAATCCGGAACACTCGAGTCCAGACTCTGGCGCAAGGAGACAATCAA 7282 |||||| | |||||| || || || ||||| | || |||| ||||||||||| || Sbjct 8828 GAGAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAG 8887 Query 7283 GTCATTTGCACCCAATATATGCTCAGCCCCAGCAGAGATGAGAAAGAGATGAAAGAGAAG 7342 || || || || || |||| | |||| | | | || | || |||| | ||| Sbjct 8888 GTTATATGTACTCACTATA----AAATCCCAACCGTTA-GAACACCTGAAGAAA-AAAAG 8941 Query 7343 ---CTGAAACACATAG-----CAGAAAACAATGGGGTTATCATGAGCGCCATCGAGAGGG 7394 || | ||| || ||||| |||| | ||||||| || | | | Sbjct 8942 CCCCTCATACAAGGAGCGATTCAGAACACAA--ATGCCATCATGAATGCAGTAGTCGATG 8999 Query 7395 GCACAAACAAATTGGGTTTAATTATCAACAATGATGAGACTATCCAGTCAGCAGATTTCC 7454 | ||||| || || || ||||| ||||| || ||| || || || |||||||||| Sbjct 9000 GAACAAAGAAGTTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATA 9059 Query 7455 TGACATATGGAAAAATACCAATCTTCCGCGGAAACATTCGTTGTC-TAGAAGGGAAAAGG 7513 ||| ||||| ||| |||| ||||||| ||||| || ||| | | || ||| | Sbjct 9060 TGAATTATGGCAAAGTACCGATCTTCCAAGGAAATAT--CTTGCCGTTGATTACTAAACG 9117 Query 7514 TG-GTCCAGGGTGACATGTGTGACCAATGATCAACTTCCAAATTTATCT---AATGTTTT 7569 || ||| || |||| ||||||||||||||||| | | ||| || | ||||| | Sbjct 9118 TGTGTCAAGAATGACCTGTGTGACCAATGATCAGATCC---ATTCATTTGAAAATGTACT 9174 Query 7570 GTCATCAGTCTCAACAAATGC 7590 ||| |||| || |||||||| Sbjct 9175 CTCAGCAGTATCTACAAATGC 9195 Score = 172 bits (190), Expect = 4e-39 Identities = 224/307 (73%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 6670 AGTAGATCTAAATGGGTTAGACGAAGAAGATCTGGTTATCGGATTGAAAGGGAAAGAAAG 6729 |||||| |||||| || | | ||||| || || |||||| | | || || |||| Sbjct 21072 AGTAGACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAA 21131 Query 6730 AGAATTAAAGAAAGCAGGACGTTTCTTCTCCCTTATGTCATGGAAATTACGAGAGTATTT 6789 ||| | || | | | ||||| || ||||| |||||||| ||| || |||| |||| || Sbjct 21132 GGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTT 21191 Query 6790 CGTCATGACAGAATATCTGATCAAACACCACTTTGTCCCACTATTTCATGGATTGACTAT 6849 || || || |||||||| |||||| | ||| ||| || || ||| | || || ||||| Sbjct 21192 TGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTAT 21251 Query 6850 GGCGGATGACATGACTCAAGTTATGAAGAAAATGTTAGACAGAAGTCAAGGGCAAGGAGA 6909 ||| || | |||||| |||||| ||||||||| ||||||| || || |||||| Sbjct 21252 GGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGACT 21311 Query 6910 GAATGACTAC-CAGAGAGTCAGTATTGCAAACCATATTGACTATGAAAAGTGGAACAATC 6968 | ||||||| | ||| ||| || ||||| || ||||||||||| || ||||| || | Sbjct 21312 CACTGACTACTCCCAGA-TCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACC 21370 Query 6969 ACCAAAG 6975 | ||||| Sbjct 21371 ATCAAAG 21377 Score = 140 bits (154), Expect = 2e-29 Identities = 182/249 (73%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 6728 AGAGAATTAAAGAAAGCAGGACGTTTCTTCTCCCTTATGTCATGGAAATTACGAGAGTAT 6787 |||||| | || | | | ||||| || ||||| |||| ||| ||| || |||| ||||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6788 TTCGTCATGACAGAATATCTGATCAAACACCACTTTGTCCCACTATTTCATGGATTGACT 6847 || || || || |||||||| |||||| | ||| ||| || || ||| | || || ||| Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6848 ATGGCGGATGACATGACTCAAGTTATGAAGAAAATGTTAGACAGAAGTCAAGGGCAAGGA 6907 ||||| || | ||||| || || ||||||||| | |||||| || || ||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 6908 GAGAATGACTAC-CAGAGAGTCAGTATTGCAAACCATATTGACTATGAAAAGTGGAACAA 6966 | ||||| || | | ||| || ||||||||||| |||||||| ||||||||||| Sbjct 38093 CTCACGGACTATTCACAAA-TCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAA 38151 Query 6967 TCACCAAAG 6975 || ||||| Sbjct 38152 CCATCAAAG 38160 >seq283 Length=322283 Score = 136 bits (150), Expect = 3e-28 Identities = 249/360 (69%), Gaps = 6/360 (2%) Strand=Plus/Plus Query 6711 GATTGAAAGGGAAAGAAAGAGAATTAAAGAAAGCAGGACG-TTTCTTCTCCCTTATGTCA 6769 ||||||||||||||||||||||| | | ||||| |||| ||||||||| | |||| Sbjct 271955 GATTGAAAGGGAAAGAAAGAGAAATCA-GAAAGACAGACGATTTCTTCTC---TTTGTCT 272010 Query 6770 TGGAAATTACGAGAGTATTTCGTCATGACAGAATATCTGATCAAACACCACTTTGTCCCA 6829 |||| || | || |||||||| || || || ||||| || || | | ||| || Sbjct 272011 TGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCT 272070 Query 6830 CTATTTCATGGATTGACTATGGCGGATGACATGACTCAAGTTATGAAGAAAATGTTAGAC 6889 || || |||| ||| | ||| ||||||||||| |||| | ||||||||| | ||| Sbjct 272071 CTCTTCCATGTTTTGCC-ATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGAC 272129 Query 6890 AGAAGTCAAGGGCAAGGAGAGAATGACTACCAGAGAGTCAGTATTGCAAACCATATTGAC 6949 || | ||| |||||| || ||||| || || | ||||| ||||| || || Sbjct 272130 AGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGAT 272189 Query 6950 TATGAAAAGTGGAACAATCACCAAAGGAGAGAATCAAATGGACCAACGTTTCGCGTGATG 7009 || ||||| ||||| || || ||||| | || | ||| |||| ||| || ||| Sbjct 272190 TACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATG 272249 Query 7010 GGACAATTCTTGGGCTATCCATCTTTGATCGAAAAGACGCATGAGTTCTTCGAGAAAAGC 7069 || ||||||| || | | | || || | |||| ||||| |||||| | ||||| Sbjct 272250 GGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTTCCAACAAAGC 272309 Score = 100 bits (110), Expect = 2e-17 Identities = 195/287 (68%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 6823 TGTCCCACTATTTCATGGATTGACTATGGCGGATGACATGACTCAAGTTATGAAGAAAAT 6882 |||||| || || ||||| ||||| ||||| ||||||||||| |||| | |||||||| Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 6883 GTTAGACAGAAGTCAAGGGCAAGGAGAGAATGACTACCAGAGAGTCAGTATTGCAAACCA 6942 | | | ||| | ||| |||||| | ||||| || || | ||||| ||||| Sbjct 273483 GATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAACCA 273542 Query 6943 TATTGACTATGAAAAGTGGA-ACAATCACCAAAGGAGAGAATCAAATGGACCAACGTTTC 7001 || || || ||||| | || | |||| || |||| ||||| |||| |||| ||| Sbjct 273543 CATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTTCA 273602 Query 7002 GCGTGATGGGACAATTCTTG-----GGCTATCCATCTTTGATCGAAAAGACGCATGAGTT 7056 || ||||| |||| ||| || || || || || |||| |||| || Sbjct 273603 AAGTAATGGGTCAATCCTTTAGATTGGTTAACC-----TGTTCTGCCAGACCAATGAATT 273657 Query 7057 CTTCGAGAAAAGCCCGATATACTACAATGGCAGGCCGGATTTAATGC 7103 |||| | ||||| ||||||||||| | ||| | || |||||| Sbjct 273658 CTTCCAACAAAGCTTTATATACTACAAAGAGAGGACAGACCTAATGC 273704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36804111675812